PROJECT INFORMATION
GOLD Project ID
Gp0022748  
Project Name
Brevibacillus brevis X23  
Other Names
  
Legacy ER Project ID
26798  
Legacy GOLD ID
Gi18847  
NCBI BioProject Name Brevibacillus brevis X23
NCBI BioProject ID 168657
NCBI BioProject Accession PRJNA168657
NCBI Locus Tag
A616  
NCBI BioSample Accession SAMN02469906
PI
Added By JGI automated process on 2012-07-05
Last Modified By JGI automated process on 2014-08-18
Project Comments
  
Project Status
Complete and Published  
Project Relevance
  
Sequencing Center Hunan Agricultural University (China)
Collaborating Institute
  
Funding Agency
  
Project Description
B. brevis, also known as Bacillus brevis, is a gram-positive and spore-forming bacterium. It can secrete large amounts of secondary metabolites those are important for controlling pathogens. Brevibacillus brevis X23 is an appropriate bio-control agent against bacterial wilt caused by Ralstonia solanacearum. We reported herein the draft genome sequence (6,566,879 bp) and a circular plasmid (6,600 bp) of the B. brevis X23, which data may be helpful for mining the antagonistic activity against R. solanacearum.  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Journal of bacteriology 194(23):6634-5 Draft genome sequence of Brevibacillus brevis strain X23, a biocontrol agent against bacterial wilt.

Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Brevibacillus brevis X23
Organism Brevibacillus brevis X23
Analysis Projects Brevibacillus brevis X23
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina HiSeq
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
47  
Chromosome Count
  
Plasmid Count
1  
ORGANISM NAME
GOLD Organism ID Go0022748
Organism Name
Brevibacillus brevis X23  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Brevibacillus  
Genus Synonyms
  
Species
Brevibacillus brevis  
Subspecies
  
Species Synonyms
  
Strain
X23  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1200792
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Firmicutes  
NCBI Class
Bacilli  
NCBI Order
Bacillales  
NCBI Family
Paenibacillaceae  
NCBI Genus
Brevibacillus  
NCBI Species
Brevibacillus brevis  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Terrestrial  
Ecosystem Type
Soil  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Agricultural land  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

  You are going to add the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  You are going to remove permissions for the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  Changing the SP visibility will also change visibility on the following items:

 

Do you want to continue with this visibility change?

 

 

  Checking that this Sequencing Project can be made private:

 

Do you want to continue with this visibility change?