PROJECT INFORMATION
GOLD Project ID
Gp0222981  
Project Name
Mycobacterium tuberculosis H37Ra  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Genome sequencing of Mycobacterium tuberculosis H37Ra
NCBI BioProject ID 329548
NCBI BioProject Accession PRJNA329548
NCBI Locus Tag
  
NCBI BioSample Accession SAMN05414673
PI
Added By JGI automated process on 2017-07-13
Last Modified By JGI automated process on 2017-07-14
Project Comments
  
Project Status
Complete and Published  
Project Relevance Model Organism
Sequencing Center San Diego State University (USA)
Collaborating Institute
  
Funding Agency
  
Project Description
Genome sequencing of Mycobacterium tuberculosis H37Ra  
Is JGI Project
  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
 
SRA Experiment Id SRX1959958
Experiment Title Single-molecule sequencing of Mycobacterium tuberculosis H37Ra genomic DNA
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Name A7
Library Layout SINGLE
Library Instrument PAC_BIO_RS_II
 
SRA Experiment Id SRX1959957
Experiment Title Single-molecule sequencing of Mycobacterium tuberculosis H37Ra genomic DNA
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Name A6
Library Layout SINGLE
Library Instrument PAC_BIO_RS_II
PROJECT COMPOSITION
Study Mycobacterium tuberculosis H37Ra genome sequencing
Organism Mycobacterium tuberculosis H37Ra
Analysis Projects Mycobacterium tuberculosis H37Ra
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) PacBio RS
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0000131
Organism Name
Mycobacterium tuberculosis H37Ra  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
ACTINOBACTERIA  
Genus
Mycobacterium  
Genus Synonyms
  
Species
Mycobacterium tuberculosis  
Subspecies
  
Species Synonyms
  
Strain
H37Ra  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
ATCC 25177  
Type Strain
No  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
2  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 419947
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Actinobacteria  
NCBI Class
Actinobacteria  
NCBI Order
Corynebacteriales  
NCBI Family
Mycobacteriaceae  
NCBI Genus
Mycobacterium  
NCBI Species
Mycobacterium tuberculosis  
ISOLATION CLASSIFICATION
Ecosystem
Engineered  
Ecosystem Category
Laboratory developed  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 103703
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Rod-shaped  
Motility
Nonmotile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
37  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Singles
Diseases Tuberculosis
Known Habitats Host
Metabolisms
  
Phenotypes Pathogen
Energy Sources Chemoorganotroph

 

 

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