PROJECT INFORMATION
GOLD Project ID
Gp0022188  
Project Name
Methylobacter sp. BBA5.1  
Other Names
  
Legacy ER Project ID
26591  
Legacy GOLD ID
Gi18661  
NCBI BioProject Name Methylobacter sp. BBA5.1
NCBI BioProject ID 245747
NCBI BioProject Accession PRJNA245747
NCBI Locus Tag
EK22  
NCBI BioSample Accession SAMN02745761
PI marina kalyuzhnaya
Added By JGI automated process on 2012-07-05
Last Modified By JGI automated process on 2018-10-08
Project Comments
  
Project Status
Permanent Draft  
Project Relevance Comparative analysis
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information
  
Database
  
Genome Publications Genome announcements Draft Genome Sequences of Gammaproteobacterial Methanotrophs Isolated from Marine Ecosystems.
Other Publications
  
PROJECT COMPOSITION
Study Revising methanotrophy: a comprehensive genomic probing of the unexpected genetic and metabolic diversity of aerobic methane consuming bacteria.
Organism Methylobacter sp. BBA5.1
Analysis Projects Methylobacter sp. BBA5.1
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 1: Standard Draft
Finishing Goal Level 1: Standard Draft
Sequencing Comments
  
Sequencing Technology (MIGS-29) PacBio RS
Illumina MiSeq
Illumina HiSeq 2000
PacBio RS II
Library Method (MIGS-28)
Illumina Regular Fragment, 300bp, Tubes; PacBio >10kb w/ AMPure Bead Size Selection, Tubes  
Number Of Reads
  
Read Size
5074273  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0022188
Organism Name
Methylobacter sp. BBA5.1  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-GAMMA  
Genus
Methylobacter  
Genus Synonyms
  
Species
Methylobacter sp. BBA5.1  
Subspecies
  
Species Synonyms
  
Strain
BBA5.1  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1495064
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Gammaproteobacteria  
NCBI Order
Methylococcales  
NCBI Family
Methylococcaceae  
NCBI Genus
Methylobacter  
NCBI Species
Methylobacter sp. BBA5.1  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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