PROJECT INFORMATION
GOLD Project ID
Gp0220882  
Project Name
Deinococcus ficus CC-FR2-10  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Deinococcus ficus CC-FR2-10 Genome sequencing and assembly
NCBI BioProject ID 373829
NCBI BioProject Accession PRJNA373829
NCBI Locus Tag
DFI  
NCBI BioSample Accession SAMN06314862
PI Young, Chiu-Chung
Added By Huang Hsin-Chieh on 2017-07-07
Last Modified By Tatiparthi Reddy on 2017-08-01
Project Comments
Deinococcus ficus CC-FR2-10 can utilize several carbon sources, and was found to possess extreme resistance to UV light, gamma radiation and desiccation. The goal of this study was to elucidate the genetic background of this organism for its distinct phenotypic features.  
Project Status
Complete and Published  
Project Relevance
  
Sequencing Center National Health Research Institutes (NHRI),Taiwan (Taiwan)
Collaborating Institute
  
Funding Agency
  
Project Description
Deinococcus ficus CC-FR2-10 can utilize several carbon sources, and was found to possess extreme resistance to UV light, gamma radiation and desiccation. The goal of this study was to elucidate the genetic background of this organism for its distinct phenotypic features.  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
PROJECT COMPOSITION
Study Genome sequencing of Deinococcus ficus CC-FR2-10
Analysis Projects Deinococcus ficus CC-FR2-10
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29) Sanger
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
1  
Plasmid Count
4  
ORGANISM NAME
GOLD Organism ID Go0373714
Organism Name
Deinococcus ficus CC-FR2-10  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
DEINOCOCCUS-THERMUS  
Genus
Deinococcus  
Genus Synonyms
  
Species
Deinococcus ficus  
Subspecies
  
Species Synonyms
  
Strain
CC-FR2-10  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 317577
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Deinococcus-Thermus  
NCBI Class
Deinococci  
NCBI Order
Deinococcales  
NCBI Family
Deinococcaceae  
NCBI Genus
Deinococcus  
NCBI Species
Deinococcus ficus  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Plants  
Ecosystem Type
Rhizosphere  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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