PROJECT INFORMATION
GOLD Project ID
Gp0022072  
Project Name
Vibrio campbellii CAIM 333  
Other Names
  
Legacy ER Project ID
26060  
Legacy GOLD ID
Gi18130  
NCBI BioProject Name Vibrio campbellii CAIM 333
NCBI BioProject ID 169678
NCBI BioProject Accession PRJNA169678
NCBI Locus Tag
B010  
NCBI BioSample Accession
PI Bruno Gomez-Gil
Added By Tatiparthi Reddy on 2012-07-02
Last Modified By Tatiparthi Reddy on 2012-07-03
Project Comments
  
Project Status
incomplete  
Project Relevance Aquaculture
Environmental
Sequencing Center Center for Food Research and Development (CIAD) (Mexico)
Collaborating Institute
  
Funding Agency National Council on Science and Technology (CONACYT) (Mexico)
Project Description
Bacteria pathogenic for aquatic animals  
Is JGI Project
  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Vibrio campbellii CAIM 333
Organism Vibrio campbellii CAIM 333
Analysis Projects
  
Number of Analysis Projects 0
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 1: Standard Draft
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Ion Torrent PGM
Library Method (MIGS-28)
emPCR  
Number Of Reads
338605  
Read Size
  
Vector
None  
GC Percent
46  
Chromosome Count
2  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0022072
Organism Name
Vibrio campbellii CAIM 333  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-GAMMA  
Genus
Vibrio  
Genus Synonyms
  
Species
Vibrio campbellii  
Subspecies
  
Species Synonyms
  
Strain
CAIM 333  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
CAIM 333  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1206055
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Gammaproteobacteria  
NCBI Order
Vibrionales  
NCBI Family
Vibrionaceae  
NCBI Genus
Vibrio  
NCBI Species
Vibrio campbellii  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Marine  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 869646
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
Facultative  
Cell Shape
Vibrio-shaped  
Motility
Motile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
30C  
Salinity
Halophile  
pH
  
Cell Diameter
  
Cell Length
  
Color
Cream  
Gram Staining
Gram-  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Singles
Diseases Vibriosis
Known Habitats Marine
Aquatic
Sea water
Metabolisms
  
Phenotypes Pathogen
Energy Sources Heterotroph

 

 

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