PROJECT INFORMATION
GOLD Project ID
Gp0021780  
Project Name
Vibrio ordalii FF-93  
Other Names
  
Legacy ER Project ID
25870  
Legacy GOLD ID
Gi18000  
NCBI BioProject Name Vibrio ordalii FF-93
NCBI BioProject ID 164841
NCBI BioProject Accession PRJNA164841
NCBI Locus Tag
A1QU  
NCBI BioSample Accession SAMN02470440
PI
Added By JGI automated process on 2012-06-08
Last Modified By JGI automated process on 2014-08-18
Project Comments
  
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center Massachusetts Institute of Technology (USA)
Collaborating Institute
  
Funding Agency
  
Project Description
Isolated from plum island (MA,USA) by size fractionation of seawater. Predicted habitat: not particle attached.  
Is JGI Project
  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications "Science (New York, N.Y.)" 337(6099):1228-31 Ecological populations of bacteria act as socially cohesive units of antibiotic production and resistance.

Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Ecological populations of bacteria act as socially cohesive units of antibiotic production and resistance
Organism Vibrio ordalii FF-93
Analysis Projects Vibrio ordalii FF-93
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina GAIIx
Illumina
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
45  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0021780
Organism Name
Vibrio ordalii FF-93  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-GAMMA  
Genus
Vibrio  
Genus Synonyms
  
Species
Vibrio ordalii  
Subspecies
  
Species Synonyms
  
Strain
FF-93  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 617132
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Gammaproteobacteria  
NCBI Order
Vibrionales  
NCBI Family
Vibrionaceae  
NCBI Genus
Vibrio  
NCBI Species
Vibrio ordalii  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Marine  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources Heterotroph

 

 

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