PROJECT INFORMATION
GOLD Project ID
Gp0021769  
Project Name
Mycoplasma mycoides mycoides C425/93  
Other Names
  
Legacy ER Project ID
25859  
Legacy GOLD ID
Gi17989  
NCBI BioProject Name Mycoplasma mycoides subsp. mycoides C425/93
NCBI BioProject ID 164815
NCBI BioProject Accession PRJNA164815
NCBI Locus Tag
MSCC  
NCBI BioSample Accession SAMN03452326
PI
Added By JGI automated process on 2012-06-08
Last Modified By Alejandro Rodriguez Mojica on 2018-07-23
Project Comments
  
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center National Institute for Agricultural Research (INRA) (France)
Collaborating Institute
  
Funding Agency
  
Project Description
The genome of Mycoplasma mycoides subsp. mycoides strain C425/93 was sequenced as part of the EVOLMYCO initiative funded by The French National Research Agency (ANR). This project aims to study the evolution of ruminant mycoplasmas with a special focus on horizontal gene transfer. Strain C425/93 from Mycoplasma mycoides subsp. mycoides was isolated in 1993 from caprine with pneumonia in Ribatejo e Oeste, Almoster, Portugal.  
Is JGI Project
  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study EVOLMYCO - INRA, France
Organism Mycoplasma mycoides mycoides C425/93
Analysis Projects Mycoplasma mycoides mycoides C425/93
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 1: Standard Draft
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina
454
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0021769
Organism Name
Mycoplasma mycoides mycoides C425/93  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
TENERICUTES  
Genus
Mycoplasma  
Genus Synonyms
  
Species
Mycoplasma mycoides  
Subspecies
mycoides  
Species Synonyms
  
Strain
C425/93  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1188255
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Tenericutes  
NCBI Class
Mollicutes  
NCBI Order
Mycoplasmatales  
NCBI Family
Mycoplasmataceae  
NCBI Genus
Mycoplasma  
NCBI Species
Mycoplasma mycoides  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

  You are going to add the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  You are going to remove permissions for the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  Changing the SP visibility will also change visibility on the following items:

 

Do you want to continue with this visibility change?

 

 

  Checking that this Sequencing Project can be made private:

 

Do you want to continue with this visibility change?