PROJECT INFORMATION
GOLD Project ID
Gp0021701  
Project Name
Rhodobaca bogoriensis DSM 18756  
Other Names
  
Legacy ER Project ID
25781  
Legacy GOLD ID
Gi17911  
NCBI BioProject Name Rhodobaca bogoriensis DSM 18756
NCBI BioProject ID 164813
NCBI BioProject Accession PRJNA164813
NCBI Locus Tag
RBOG  
NCBI BioSample Accession
PI
Added By JGI automated process on 2012-06-08
Last Modified By
Project Comments
  
Project Status
incomplete  
Project Relevance
  
Sequencing Center University of Arizona (USA)
Collaborating Institute
  
Funding Agency
  
Project Description
To sequence a variety of purple photosynthetic bacteria.  
Is JGI Project
  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Rhodobaca bogoriensis DSM 18756
Organism Rhodobaca bogoriensis DSM 18756
Analysis Projects
  
Number of Analysis Projects 0
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status In progress
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0021701
Organism Name
Rhodobaca bogoriensis DSM 18756  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-ALPHA  
Genus
Rhodobaca  
Genus Synonyms
  
Species
Rhodobaca bogoriensis  
Subspecies
  
Species Synonyms
  
Strain
DSM 18756  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
DSM 18756  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.1116  
Exemplar Name
Rhodobaca bogoriensis  
Taxon DOI
10.1601/tx.1116  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1188254
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Alphaproteobacteria  
NCBI Order
Rhodobacterales  
NCBI Family
Rhodobacteraceae  
NCBI Genus
Rhodobaca  
NCBI Species
Rhodobaca bogoriensis  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Marine  
Ecosystem Subtype
Oceanic  
Specific Ecosystem
Sediment  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID AF248638
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Sediment
Aquatic
Fresh water
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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