| PROJECT INFORMATION | |
|---|---|
GOLD Project ID
|
Gp0002102
|
|
Project Name
|
Thermoanaerobacter pseudethanolicus 39E, ATCC 33223
|
|
Other Names
|
|
|
Legacy ER Project ID
|
12000
|
|
Legacy GOLD ID
|
Gi00653, Gc00718
|
| NCBI BioProject Name | Thermoanaerobacter pseudethanolicus ATCC 33223 |
|
NCBI BioProject ID
|
13901 |
|
NCBI BioProject Accession
|
PRJNA13901 |
|
NCBI Locus Tag
|
Teth39
|
|
NCBI BioSample Accession
|
SAMN02598314 |
| PI | Fields, Matthew |
| Added By |
Nikos Kyrpides
on 2007-11-27 |
| Last Modified By |
Jon Bertsch
on 2014-04-08 |
| Project Comments |
|
|
Project Status
|
Complete and Published
|
|
Project Relevance
|
Bioenergy Ethanol production Biotechnological Energy production |
|
Sequencing Center
|
DOE Joint Genome Institute (JGI)
(USA)
|
|
Collaborating Institute
|
|
|
Funding Agency
|
U.S. Department of Energy (DOE)
(USA)
|
|
Project Description
|
Thermophilic ethanol-producing bacterium
|
|
Project Information Visibility
|
Public |
| PROJECT TYPE | |
|
Specimen
|
Organism |
|
Nucleic Acid
|
DNA |
|
Sequencing Strategy
|
Whole Genome Sequencing
|
| EXTERNAL PROJECT LINKS | |
| JGI Portal Download | Raw Sequence Data |
|
Project Information
|
Isolation |
|
Database
|
|
|
Genome Publications
|
Applied and environmental microbiology
77(22):7998-8008
Correlation of genomic and physiological traits of thermoanaerobacter species with biofuel yields.
|
|
Other Publications
|
|
| PROJECT COMPOSITION | |
| Study |
Metal-Reducing Microorganisms |
| Organism |
Thermoanaerobacter pseudethanolicus 39E, ATCC 33223 |
| Analysis Projects |
Thermoanaerobacter pseudethanolicus 39E, ATCC 33223 |
| Number of Analysis Projects |
1 |
| Number of DAPs |
0
|
| SEQUENCING INFORMATION | |
|---|---|
|
Sequencing Status
|
Complete |
| Sequencing Quality (MIGS-31) |
Level 6: Finished |
|
Finishing Goal
|
|
|
Sequencing Comments
|
|
|
Sequencing Technology
(MIGS-29)
|
Sanger 454 |
|
Library Method
(MIGS-28)
|
|
|
Number Of Reads
|
|
|
Read Size
|
|
|
Vector
|
|
| GC Percent |
35
|
| Chromosome Count |
1
|
| Plasmid Count |
0
|
| ORGANISM NAME | |
|---|---|
| GOLD Organism ID |
Go0002102 |
| Organism Name |
Thermoanaerobacter pseudethanolicus 39E, ATCC 33223
|
| Other names (alias, synonyms, short names, common names) |
|
| Organism Domain |
BACTERIAL
|
| Phylogeny |
FIRMICUTES
|
| Genus |
Thermoanaerobacter
|
| Genus Synonyms |
|
| Species |
Thermoanaerobacter pseudethanolicus
|
| Subspecies |
|
| Species Synonyms |
|
| Strain |
39E
|
| Strain Synonyms |
|
| Serovar-Biovar |
|
| Culture Collection ID |
ATCC 33223
|
| Type Strain |
Yes
|
| Exemplar DOI |
10.1601/ex.11395
|
| Exemplar Name |
Thermoanaerobacter pseudethanolicus
|
| Taxon DOI |
10.1601/tx.11395
|
| Biosafety Level |
1
|
| Organism Comments |
|
| Cultured |
Yes
|
| Culture Type |
Isolate
|
| Organism Type |
Natural
|
| Uncultured Type |
|
| Commercial Strain |
|
| Commercial Strain Comments |
|
|
ORGANISM TAXONOMY
|
|
| NCBI Taxonomy ID |
340099 |
| NCBI Superkingdom |
Bacteria
|
| NCBI Kingdom |
|
| NCBI Phylum |
Firmicutes
|
| NCBI Class |
Clostridia
|
| NCBI Order |
Thermoanaerobacterales
|
| NCBI Family |
Thermoanaerobacteraceae
|
| NCBI Genus |
Thermoanaerobacter
|
| NCBI Species |
Thermoanaerobacter pseudethanolicus
|
| ISOLATION CLASSIFICATION | |
| Ecosystem |
Environmental
|
| Ecosystem Category |
Aquatic
|
| Ecosystem Type |
Thermal springs
|
| Ecosystem Subtype |
Unclassified
|
| Specific Ecosystem |
Unclassified
|
| ORGANISM EXTERNAL REFERENCES | |
| Strain Info ID |
157929 |
| Genbank 16S ID |
L09164 |
| GENERAL PROPERTIES | |
|---|---|
| Oxygen Requirement |
Anaerobe
|
| Cell Shape |
Rod-shaped
|
| Motility |
Motile
|
| Sporulation |
Sporulating
|
| Temperature Range |
Thermophile
|
| Temperature Optimum |
65
|
| Salinity |
|
| pH |
|
| Cell Diameter |
|
| Cell Length |
|
| Color |
|
| Gram Staining |
Gram+
|
| Biotic Relationships | Free living |
| Symbiotic Physical Interaction |
|
| Symbiotic Relationship |
|
| Symbiont Name |
|
| Symbiont Taxon ID |
|
| Cell Arrangements |
|
| Diseases |
None |
| Known Habitats |
Hot spring Fresh water |
| Metabolisms |
Ethanol production Sugars fermentor Iron reducer |
| Phenotypes |
|
| Energy Sources |
|
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