PROJECT INFORMATION | |
---|---|
GOLD Project ID
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Gp0002102
|
Project Name
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Thermoanaerobacter pseudethanolicus 39E, ATCC 33223
|
Other Names
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|
Legacy ER Project ID
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12000
|
Legacy GOLD ID
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Gi00653, Gc00718
|
NCBI BioProject Name | Thermoanaerobacter pseudethanolicus ATCC 33223 |
NCBI BioProject ID
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13901 |
NCBI BioProject Accession
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PRJNA13901 |
NCBI Locus Tag
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Teth39
|
NCBI BioSample Accession
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SAMN02598314 |
PI | Fields, Matthew |
Added By |
Nikos Kyrpides
on 2007-11-27 |
Last Modified By |
Jon Bertsch
on 2014-04-08 |
Project Comments |
|
Project Status
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Complete and Published
|
Project Relevance
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Bioenergy Ethanol production Biotechnological Energy production |
Sequencing Center
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DOE Joint Genome Institute (JGI)
(USA)
|
Collaborating Institute
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|
Funding Agency
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U.S. Department of Energy (DOE)
(USA)
|
Project Description
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Thermophilic ethanol-producing bacterium
|
Project Information Visibility
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Public |
PROJECT TYPE | |
Specimen
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Organism |
Nucleic Acid
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DNA |
Sequencing Strategy
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Whole Genome Sequencing
|
EXTERNAL PROJECT LINKS | |
JGI Portal Download | Raw Sequence Data |
Project Information
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Isolation |
Database
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|
Genome Publications
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Applied and environmental microbiology
77(22):7998-8008
Correlation of genomic and physiological traits of thermoanaerobacter species with biofuel yields.
|
Other Publications
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|
PROJECT COMPOSITION | |
Study |
Metal-Reducing Microorganisms |
Organism |
Thermoanaerobacter pseudethanolicus 39E, ATCC 33223 |
Analysis Projects |
Thermoanaerobacter pseudethanolicus 39E, ATCC 33223 |
Number of Analysis Projects |
1 |
Number of DAPs |
0
|
SEQUENCING INFORMATION | |
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Sequencing Status
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Complete |
Sequencing Quality (MIGS-31) |
Level 6: Finished |
Finishing Goal
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|
Sequencing Comments
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|
Sequencing Technology
(MIGS-29)
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Sanger 454 |
Library Method
(MIGS-28)
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|
Number Of Reads
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|
Read Size
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|
Vector
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|
GC Percent |
35
|
Chromosome Count |
1
|
Plasmid Count |
0
|
ORGANISM NAME | |
---|---|
GOLD Organism ID |
Go0002102 |
Organism Name |
Thermoanaerobacter pseudethanolicus 39E, ATCC 33223
|
Other names (alias, synonyms, short names, common names) |
|
Organism Domain |
BACTERIAL
|
Phylogeny |
FIRMICUTES
|
Genus |
Thermoanaerobacter
|
Genus Synonyms |
|
Species |
Thermoanaerobacter pseudethanolicus
|
Subspecies |
|
Species Synonyms |
|
Strain |
39E
|
Strain Synonyms |
|
Serovar-Biovar |
|
Culture Collection ID |
ATCC 33223
|
Type Strain |
Yes
|
Exemplar DOI |
10.1601/ex.11395
|
Exemplar Name |
Thermoanaerobacter pseudethanolicus
|
Taxon DOI |
10.1601/tx.11395
|
Biosafety Level |
1
|
Organism Comments |
|
Cultured |
Yes
|
Culture Type |
Isolate
|
Organism Type |
Natural
|
Uncultured Type |
|
Commercial Strain |
|
Commercial Strain Comments |
|
ORGANISM TAXONOMY
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|
NCBI Taxonomy ID |
340099 |
NCBI Superkingdom |
Bacteria
|
NCBI Kingdom |
|
NCBI Phylum |
Firmicutes
|
NCBI Class |
Clostridia
|
NCBI Order |
Thermoanaerobacterales
|
NCBI Family |
Thermoanaerobacteraceae
|
NCBI Genus |
Thermoanaerobacter
|
NCBI Species |
Thermoanaerobacter pseudethanolicus
|
ISOLATION CLASSIFICATION | |
Ecosystem |
Environmental
|
Ecosystem Category |
Aquatic
|
Ecosystem Type |
Thermal springs
|
Ecosystem Subtype |
Unclassified
|
Specific Ecosystem |
Unclassified
|
ORGANISM EXTERNAL REFERENCES | |
Strain Info ID |
157929 |
Genbank 16S ID |
L09164 |
GENERAL PROPERTIES | |
---|---|
Oxygen Requirement |
Anaerobe
|
Cell Shape |
Rod-shaped
|
Motility |
Motile
|
Sporulation |
Sporulating
|
Temperature Range |
Thermophile
|
Temperature Optimum |
65
|
Salinity |
|
pH |
|
Cell Diameter |
|
Cell Length |
|
Color |
|
Gram Staining |
Gram+
|
Biotic Relationships | Free living |
Symbiotic Physical Interaction |
|
Symbiotic Relationship |
|
Symbiont Name |
|
Symbiont Taxon ID |
|
Cell Arrangements |
|
Diseases |
None |
Known Habitats |
Hot spring Fresh water |
Metabolisms |
Ethanol production Sugars fermentor Iron reducer |
Phenotypes |
|
Energy Sources |
|
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