PROJECT NAME
GOLD Project ID
Gp0208313  
Project Name
Vagococcus penaei CD276  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Genome sequencing and assembly of Vagococcus penaei CD276
NCBI BioProject ID 362684
NCBI BioProject Accession PRJNA362684
NCBI Locus Tag
BW732  
NCBI BioSample Accession SAMN06245872
PI Euon Jung Tak
Added By Euon Jung Tak on 2017-03-08
Last Modified By Supratim Mukherjee on 2017-03-17
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance
  
Sequencing Center Macrogen Inc
Collaborating Institute
  
Funding Agency
  
Project Description
Genome sequencing and assembly of Vagococcus penaei CD276, isolated from spoilage microbiota of cooked shrimp  
Project Information Visibility Public
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
PROJECT COMPOSITION
Study Genome sequencing and assembly of Vagococcus penaei CD276
Analysis Projects Vagococcus penaei CD276
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) PacBio RS II
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0367842
Organism Name
Vagococcus penaei CD276  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Vagococcus  
Genus Synonyms
  
Species
Vagococcus penaei  
Subspecies
  
Species Synonyms
  
Strain
CD276  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
Yes  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 633807
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Firmicutes  
NCBI Class
Bacilli  
NCBI Order
Lactobacillales  
NCBI Family
Enterococcaceae  
NCBI Genus
Vagococcus  
NCBI Species
Vagococcus penaei  
ISOLATION CLASSIFICATION
Ecosystem
Engineered  
Ecosystem Category
Food production  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
Coccus-shaped  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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