PROJECT INFORMATION
GOLD Project ID
Gp0020588  
Project Name
Oceanicaulis sp. NGOC  
Other Names
  
Legacy ER Project ID
9830  
Legacy GOLD ID
Gi16919  
NCBI BioProject Name Oceanicaulis sp. NGOC
NCBI BioProject ID 84329
NCBI BioProject Accession PRJNA84329
NCBI Locus Tag
NGOC  
NCBI BioSample Accession
PI
Added By JGI automated process on 2012-04-04
Last Modified By Jakob Jansson on 2012-06-12
Project Comments
  
Project Status
incomplete  
Project Relevance Environmental
Sequencing Center Colorado School of Mines (USA)
Collaborating Institute
  
Funding Agency
  
Project Description
Oceanicaulis gaditana Metagenome assembly  
Is JGI Project
  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Oceanicaulis sp. NGOC
Organism Oceanicaulis sp. NGOC
Analysis Projects
  
Number of Analysis Projects 0
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status In progress
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0020588
Organism Name
Oceanicaulis sp. NGOC  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-ALPHA  
Genus
Oceanicaulis  
Genus Synonyms
  
Species
Oceanicaulis sp. NGOC  
Subspecies
  
Species Synonyms
  
Strain
NGOC  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
No  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1154763
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Alphaproteobacteria  
NCBI Order
Rhodobacterales  
NCBI Family
Hyphomonadaceae  
NCBI Genus
Oceanicaulis  
NCBI Species
Oceanicaulis sp. NGOC  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Algae  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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