PROJECT INFORMATION
GOLD Project ID
Gp0020476  
Project Name
Enterococcus hirae ATCC 8043  
Other Names
  
Legacy ER Project ID
9771  
Legacy GOLD ID
Gi16860  
NCBI BioProject Name Enterococcus hirae ATCC 9790
NCBI BioProject ID 88835
NCBI BioProject Accession PRJNA88835
NCBI Locus Tag
UAE  
NCBI BioSample Accession SAMN00809107
PI
Added By JGI automated process on 2012-04-04
Last Modified By JGI automated process on 2014-08-18
Project Comments
  
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center Broad Institute (USA)
Collaborating Institute
  
Funding Agency
  
Project Description
Enterococcus hirae ATCC 8043 Genome sequencing  
Is JGI Project
  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
 
SRA Experiment Id SRX155291
Experiment Title Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Solexa-93634' containing sample 'ATCC8043' from individual 'Enterococcus hirae ATCC8043'
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Name Solexa-93634
Library Layout PAIRED
Library Instrument ILLUMINA_HI_SEQ_2000
Spot Length 202
 
SRA Experiment Id SRX152343
Experiment Title Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-149847' containing sample 'ATCC8043' from individual 'Enterococcus hirae ATCC8043'
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Name Pond-149847
Library Layout PAIRED
Library Instrument ILLUMINA_HI_SEQ_2000
Spot Length 202
 
SRA Experiment Id SRX228381
Experiment Title Pacbio whole genome shotgun sequencing of genomic DNA library 'PACBIO-319' containing sample 'ATCC8043' from individual 'Enterococcus hirae ATCC8043'
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Name PACBIO-319
Library Layout SINGLE
Library Instrument PAC_BIO_RS
PROJECT COMPOSITION
Study Enterococcus hirae ATCC 8043
Organism Enterococcus hirae ATCC 8043
Analysis Projects Enterococcus hirae ATCC 8043
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
37  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0020476
Organism Name
Enterococcus hirae ATCC 8043  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Enterococcus  
Genus Synonyms
  
Species
Enterococcus hirae  
Subspecies
  
Species Synonyms
  
Strain
ATCC 8043  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
ATCC 8043  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.5540  
Exemplar Name
Enterococcus hirae  
Taxon DOI
10.1601/tx.5540  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 768486
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Firmicutes  
NCBI Class
Bacilli  
NCBI Order
Lactobacillales  
NCBI Family
Enterococcaceae  
NCBI Genus
Enterococcus  
NCBI Species
Enterococcus hirae  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
Facultative  
Cell Shape
Coccus-shaped  
Motility
Nonmotile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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