PROJECT INFORMATION
GOLD Project ID
Gp0018978  
Project Name
Oenococcus oeni AWRIB304  
Other Names
  
Legacy ER Project ID
9220  
Legacy GOLD ID
Gi16309  
NCBI BioProject Name Oenococcus oeni AWRIB304
NCBI BioProject ID 89139
NCBI BioProject Accession PRJNA89139
NCBI Locus Tag
AWRIB304  
NCBI BioSample Accession SAMN02471120
PI
Added By JGI automated process on 2012-04-04
Last Modified By JGI automated process on 2014-10-31
Project Comments
  
Project Status
Permanent Draft  
Project Relevance Fermentation
Sequencing Center The Australian Wine Research Institute (Australia)
Collaborating Institute
  
Funding Agency
  
Project Description
Genetic diversity in Oenococcus oeni revealed through multi-strain genome sequencing  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications BMC genomics 13(373):373 Comparative analysis of the Oenococcus oeni pan genome reveals genetic diversity in industrially-relevant pathways.
Other Publications
  
PROJECT COMPOSITION
Study Oenococcus oeni genome sequencing
Organism Oenococcus oeni AWRIB304
Analysis Projects Oenococcus oeni AWRIB304
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina GAIIx
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
38  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0018978
Organism Name
Oenococcus oeni AWRIB304  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Oenococcus  
Genus Synonyms
  
Species
Oenococcus oeni  
Subspecies
  
Species Synonyms
  
Strain
AWRIB304  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
No  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1160702
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Firmicutes  
NCBI Class
Bacilli  
NCBI Order
Lactobacillales  
NCBI Family
Leuconostocaceae  
NCBI Genus
Oenococcus  
NCBI Species
Oenococcus oeni  
ISOLATION CLASSIFICATION
Ecosystem
Engineered  
Ecosystem Category
Food production  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
Facultative  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources Heterotroph

 

 

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