PROJECT INFORMATION
GOLD Project ID
Gp0188013  
Project Name
Nocardia rhamnosiphila NRRL B-24637  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Natural product rich actinomycete genome sequencing
NCBI BioProject ID 238534
NCBI BioProject Accession PRJNA238534
NCBI Locus Tag
IG71  
NCBI BioSample Accession SAMN02645234
PI
Added By JGI automated process on 2016-12-10
Last Modified By
Project Comments
  
Project Status
Permanent Draft  
Project Relevance Medical
Sequencing Center University of Illinois, Urbana-Champaign (USA)
Collaborating Institute
  
Funding Agency
  
Project Description
Genome sequencing of actinomycete strain selected primarily for its potential to produce phosphonate secondary metabolites.  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
PROJECT COMPOSITION
Study Genome mining of actinomycete strains to discover natural products
Organism Nocardia rhamnosiphila NRRL B-24637
Analysis Projects Nocardia rhamnosiphila NRRL B-24637
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0353756
Organism Name
Nocardia rhamnosiphila NRRL B-24637  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
ACTINOBACTERIA  
Genus
Nocardia  
Genus Synonyms
  
Species
Nocardia rhamnosiphila  
Subspecies
  
Species Synonyms
  
Strain
NRRL B-24637  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
NRRL B-24637  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.22757  
Exemplar Name
Nocardia rhamnosiphila  
Taxon DOI
10.1601/tx.22757  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1223547
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Actinobacteria  
NCBI Class
Actinobacteria  
NCBI Order
Corynebacteriales  
NCBI Family
Nocardiaceae  
NCBI Genus
Nocardia  
NCBI Species
Nocardia rhamnosiphila  
ISOLATION CLASSIFICATION
Ecosystem
Engineered  
Ecosystem Category
Solid waste  
Ecosystem Type
Composting  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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