PROJECT INFORMATION
GOLD Project ID
Gp0172106  
Project Name
Neisseria lactamica 583_NLAC  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Bacterial isolate from intensive care units
NCBI BioProject ID 267549
NCBI BioProject Accession PRJNA267549
NCBI Locus Tag
ADD85  
NCBI BioSample Accession SAMN03197784
PI
Added By JGI automated process on 2016-10-20
Last Modified By Supratim Mukherjee on 2016-10-25
Project Comments
  
Project Status
Permanent Draft  
Project Relevance Medical
Sequencing Center University of Washington (USA)
Collaborating Institute
  
Funding Agency
  
Project Description
Whole genome sequencing of bacterial isolate from Sputum sample from patient in Critical Care Intensive Care Unit of University of Washington Medical Center, Seattle, USA  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
PROJECT COMPOSITION
Study Whole genome sequencing of bacterial isolates collected over a 1-year period from the intensive care unit of University of Washington Medical Center
Analysis Projects Neisseria lactamica 583_NLAC
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina HiSeq
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0323622
Organism Name
Neisseria lactamica 583_NLAC  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-BETA  
Genus
Neisseria  
Genus Synonyms
  
Species
Neisseria lactamica  
Subspecies
  
Species Synonyms
  
Strain
583_NLAC  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 486
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Betaproteobacteria  
NCBI Order
Neisseriales  
NCBI Family
Neisseriaceae  
NCBI Genus
Neisseria  
NCBI Species
Neisseria lactamica  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Human  
Ecosystem Type
Respiratory system  
Ecosystem Subtype
Pulmonary system  
Specific Ecosystem
Sputum  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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