PROJECT INFORMATION
GOLD Project ID
Gp0017124  
Project Name
Thermococcus litoralis DSM 5473  
Other Names
  
Legacy ER Project ID
8002  
Legacy GOLD ID
Gi13718, Gc0008002  
NCBI BioProject Name Thermococcus litoralis DSM 5473
NCBI BioProject ID 81925
NCBI BioProject Accession PRJNA81925
NCBI Locus Tag
OCC  
NCBI BioSample Accession
PI
Added By JGI automated process on 2012-02-02
Last Modified By JGI automated process on 2014-08-18
Project Comments
  
Project Status
Complete and Published  
Project Relevance
  
Sequencing Center New England Biolabs (USA)
Collaborating Institute
  
Funding Agency
  
Project Description
Thermococcus litoralis DSM 5473 Genome sequencing  
Is JGI Project
  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Journal of bacteriology 194(9):2375-6 Genome sequence of the model hyperthermophilic archaeon Thermococcus litoralis NS-C.

Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Thermococcus litoralis DSM 5473
Organism Thermococcus litoralis DSM 5473
Analysis Projects Thermococcus litoralis DSM 5473
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
43  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0017124
Organism Name
Thermococcus litoralis DSM 5473  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
ARCHAEAL  
Phylogeny
EURYARCHAEOTA-THERMOCOCCI  
Genus
Thermococcus  
Genus Synonyms
  
Species
Thermococcus litoralis  
Subspecies
  
Species Synonyms
  
Strain
DSM 5473  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
DSM 5473  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.387  
Exemplar Name
Thermococcus litoralis  
Taxon DOI
10.1601/tx.387  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 523849
NCBI Superkingdom
Archaea  
NCBI Kingdom
  
NCBI Phylum
Euryarchaeota  
NCBI Class
Thermococci  
NCBI Order
Thermococcales  
NCBI Family
Thermococcaceae  
NCBI Genus
Thermococcus  
NCBI Species
Thermococcus litoralis  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Thermal springs  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
Coccus-shaped  
Motility
  
Sporulation
  
Temperature Range
Hyperthermophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Hot spring
Aquatic
Metabolisms
  
Phenotypes
  
Energy Sources Heterotroph

 

 

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