PROJECT INFORMATION
GOLD Project ID
Gp0150777  
Project Name
Pyrococcus kukulkanii NCB100  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Pyrococcus kukulkanii strain:NCB100
NCBI BioProject ID 274214
NCBI BioProject Accession PRJNA274214
NCBI Locus Tag
TQ32  
NCBI BioSample Accession SAMN03323778
PI
Added By JGI automated process on 2016-06-28
Last Modified By Hema Katta on 2018-05-30
Project Comments
  
Project Status
Complete and Published  
Project Relevance Environmental
Sequencing Center Ecole Normale Superieure de Lyon
Collaborating Institute
  
Funding Agency
  
Project Description
A novel hyperthermophilic, anaerobic archaeon, designed as NCB100, was isolated from a hydrothermal vent sample collected on the Guaymas basin at a depth of 1997 m on the hydrothermal vent site named Rebeccas Roost.  
Is JGI Project
  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Genome announcements Complete Genome Sequence of the Hyperthermophilic Piezophilic Archaeon NCB100 Isolated from the Rebecca's Roost Hydrothermal Vent in the Guaymas Basin.

Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Pyrococcus kukulkanii NCB100 genome sequencing
Organism Pyrococcus kukulkanii NCB100
Analysis Projects Pyrococcus kukulkanii NCB100
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina
Ion Torrent PGM
454
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0145142
Organism Name
Pyrococcus kukulkanii NCB100  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
ARCHAEAL  
Phylogeny
EURYARCHAEOTA-THERMOCOCCI  
Genus
Pyrococcus  
Genus Synonyms
  
Species
Pyrococcus kukulkanii  
Subspecies
  
Species Synonyms
  
Strain
NCB100  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
DSM 101590  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.28872  
Exemplar Name
Pyrococcus kukulkanii  
Taxon DOI
10.1601/tx.28872  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1609559
NCBI Superkingdom
Archaea  
NCBI Kingdom
  
NCBI Phylum
Euryarchaeota  
NCBI Class
Thermococci  
NCBI Order
Thermococcales  
NCBI Family
Thermococcaceae  
NCBI Genus
Pyrococcus  
NCBI Species
Pyrococcus kukulkanii  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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