PROJECT INFORMATION
GOLD Project ID
Gp0149990  
Project Name
Clostridium tyrobutyricum DSM 2637  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Clostridium tyrobutyricum JCM 11008
NCBI BioProject ID 280257
NCBI BioProject Accession PRJDB1432
NCBI Locus Tag
JCM11008  
NCBI BioSample Accession SAMD00036756
PI
Added By JGI automated process on 2016-06-28
Last Modified By Supratim Mukherjee on 2017-03-29
Project Comments
  
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center Tokyo University of Marine Science and Technology
Collaborating Institute
  
Funding Agency
  
Project Description
Clostridium tyrobutyricum is recognized as the main agent responsible for cheese degradation, which often results in serious economic losses. In a study, this strain was sequenced for the development of novel detection assays.  
Is JGI Project
  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
PROJECT COMPOSITION
Study Clostridium tyrobutyricum JCM 11008
Organism Clostridium tyrobutyricum DSM 2637
Analysis Projects Clostridium tyrobutyricum DSM 2637
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454 GS Junior
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0040854
Organism Name
Clostridium tyrobutyricum DSM 2637  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Clostridium  
Genus Synonyms
  
Species
Clostridium tyrobutyricum  
Subspecies
  
Species Synonyms
  
Strain
DSM 2637  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 2637  
Type Strain
Unknown  
Exemplar DOI
10.1601/ex.4047  
Exemplar Name
Clostridium tyrobutyricum  
Taxon DOI
10.1601/tx.4047  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1121342
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Firmicutes  
NCBI Class
Clostridia  
NCBI Order
Clostridiales  
NCBI Family
Clostridiaceae  
NCBI Genus
Clostridium  
NCBI Species
Clostridium tyrobutyricum  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Plants  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 8051
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
Anaerobe  
Cell Shape
Rod-shaped  
Motility
  
Sporulation
Sporulating  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Plants
Metabolisms
  
Phenotypes
  
Energy Sources Heterotroph

 

 

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