PROJECT INFORMATION
GOLD Project ID
Gp0148800  
Project Name
Bacteroides fluxus DSM 22534  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Bacteroides fluxus DSM 22534
NCBI BioProject ID 335199
NCBI BioProject Accession PRJNA335199
NCBI Locus Tag
BD827  
NCBI BioSample Accession SAMN05444403
PI Markus Göker
Added By JGI automated process on 2016-06-17
Last Modified By JGI automated process on 2019-04-28
Project Comments
  
Project Status
incomplete  
Project Relevance
  
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Sequencing as part of the Genomic Encyclopedia of Archaeal and Bacterial Type Strains, Phase II project  
Is JGI Project
  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Genomic Encyclopedia of Archaeal and Bacterial Type Strains, Phase II (KMG-II): from individual species to whole genera
Organism Bacteroides fluxus YIT 12057
Analysis Projects Bacteroides fluxus DSM 22534
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status In progress
Sequencing Quality (MIGS-31) Level 1: Standard Draft
Finishing Goal Level 1: Standard Draft
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina HiSeq 2500-1TB
Library Method (MIGS-28)
Illumina Regular Fragment, 300bp, Plates  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0006728
Organism Name
Bacteroides fluxus YIT 12057  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
BACTEROIDETES  
Genus
Bacteroides  
Genus Synonyms
  
Species
Bacteroides fluxus  
Subspecies
  
Species Synonyms
  
Strain
YIT 12057  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
DSM 22534  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.20024  
Exemplar Name
Bacteroides fluxus  
Taxon DOI
10.1601/tx.20024  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 763034
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Bacteroidetes  
NCBI Class
Bacteroidia  
NCBI Order
Bacteroidales  
NCBI Family
Bacteroidaceae  
NCBI Genus
Bacteroides  
NCBI Species
Bacteroides fluxus  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Human  
Ecosystem Type
Digestive system  
Ecosystem Subtype
Large intestine  
Specific Ecosystem
Fecal  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID AB490802
GENERAL PROPERTIES
Oxygen Requirement
Obligate anaerobe  
Cell Shape
Rod-shaped  
Motility
  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Human intestinal microflora
Host
Gastrointestinal tract
Feces
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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