PROJECT INFORMATION
GOLD Project ID
Gp0148793  
Project Name
Clostridium amylolyticum DSM 21864  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Clostridium amylolyticum DSM 21864
NCBI BioProject ID 335192
NCBI BioProject Accession PRJNA335192
NCBI Locus Tag
BD820  
NCBI BioSample Accession SAMN05444401
PI Markus Göker
Added By JGI automated process on 2016-06-17
Last Modified By JGI automated process on 2018-10-08
Project Comments
  
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Sequencing as part of the Genomic Encyclopedia of Archaeal and Bacterial Type Strains, Phase II project  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
PROJECT COMPOSITION
Study Genomic Encyclopedia of Archaeal and Bacterial Type Strains, Phase II (KMG-II): from individual species to whole genera
Organism Clostridium amylolyticum DSM 21864
Analysis Projects Clostridium amylolyticum DSM 21864
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 1: Standard Draft
Finishing Goal Level 1: Standard Draft
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina HiSeq 2500-1TB
Library Method (MIGS-28)
Illumina Regular Fragment, 300bp, Plates  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0013482
Organism Name
Clostridium amylolyticum DSM 21864  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Clostridium  
Genus Synonyms
  
Species
Clostridium amylolyticum  
Subspecies
  
Species Synonyms
  
Strain
DSM 21864  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 21864  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.13283  
Exemplar Name
Clostridium amylolyticum  
Taxon DOI
10.1601/tx.13283  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1121298
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Firmicutes  
NCBI Class
Clostridia  
NCBI Order
Clostridiales  
NCBI Family
Clostridiaceae  
NCBI Genus
Clostridium  
NCBI Species
Clostridium amylolyticum  
ISOLATION CLASSIFICATION
Ecosystem
Engineered  
Ecosystem Category
Biotransformation  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
Anaerobe  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
37 C  
Salinity
  
pH
4.0-9.0  
Cell Diameter
0.5-0.7 um  
Cell Length
2.0-7.5 um  
Color
  
Gram Staining
Gram+  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Bioreactor
Metabolisms
  
Phenotypes
  
Energy Sources Chemoorganotroph

 

 

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