PROJECT INFORMATION
GOLD Project ID
Gp0145509  
Project Name
Phaeobacter inhibens S4Sm  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Phaeobacter inhibens strain:S4Sm
NCBI BioProject ID 304642
NCBI BioProject Accession PRJNA304642
NCBI Locus Tag
AT574  
NCBI BioSample Accession SAMN04305441
PI
Added By JGI automated process on 2016-05-18
Last Modified By Supratim Mukherjee on 2017-03-29
Project Comments
  
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center University of Rhode Island
Collaborating Institute
  
Funding Agency
  
Project Description
Phaeobacter inhibens S4Sm is a spontaneous streptomycin resistant mutant of a probiotic microbe isolated from the inner shell of a healthy eastern oyster (Crassostrea virginica)  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
PROJECT COMPOSITION
Study Phaeobacter inhibens S4Sm genome sequencing and assembly
Organism Phaeobacter inhibens S4Sm
Analysis Projects Phaeobacter inhibens S4Sm
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina MiSeq
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0140398
Organism Name
Phaeobacter inhibens S4Sm  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-ALPHA  
Genus
Phaeobacter  
Genus Synonyms
  
Species
Phaeobacter inhibens  
Subspecies
  
Species Synonyms
  
Strain
S4Sm  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 221822
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Alphaproteobacteria  
NCBI Order
Rhodobacterales  
NCBI Family
Rhodobacteraceae  
NCBI Genus
Phaeobacter  
NCBI Species
Phaeobacter inhibens  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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