PROJECT INFORMATION
GOLD Project ID
Gp0014201  
Project Name
Oenococcus kitaharae NRIC 0645, DSM 17330  
Other Names
  
Legacy ER Project ID
21232  
Legacy GOLD ID
Gi12091, Gi0021232  
NCBI BioProject Name Oenococcus kitaharae DSM 17330
NCBI BioProject ID 165467
NCBI BioProject Accession PRJNA165467
NCBI Locus Tag
A3IQ  
NCBI BioSample Accession SAMN02441565
PI Jonathan Eisen
Added By Nikos Kyrpides on 2012-01-25
Last Modified By JGI automated process on 2014-08-18
Project Comments
  
Project Status
Permanent Draft  
Project Relevance Tree of Life
GEBA
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Leibniz Institute (Germany)
Project Description
Continuation of the Genomic Encyclopedia of Bacteria and Archaea pilot project  
Is JGI Project
Yes  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
PROJECT COMPOSITION
Study Continuation of the Genomic Encyclopedia of Bacteria and Archaea pilot project (GEBA)
Organism Oenococcus kitaharae NRIC 0645, DSM 17330
Analysis Projects Oenococcus kitaharae NRIC 0645, DSM 17330
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 1: Standard Draft
Finishing Goal Level 1: Standard Draft
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina HiSeq 2000
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
43  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0014201
Organism Name
Oenococcus kitaharae NRIC 0645, DSM 17330  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Oenococcus  
Genus Synonyms
  
Species
Oenococcus kitaharae  
Subspecies
  
Species Synonyms
  
Strain
NRIC 0645, DSM 17330  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 17330  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.10914  
Exemplar Name
Oenococcus kitaharae  
Taxon DOI
10.1601/tx.10914  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1045004
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Firmicutes  
NCBI Class
Bacilli  
NCBI Order
Lactobacillales  
NCBI Family
Leuconostocaceae  
NCBI Genus
Oenococcus  
NCBI Species
Oenococcus kitaharae  
ISOLATION CLASSIFICATION
Ecosystem
Engineered  
Ecosystem Category
Food production  
Ecosystem Type
Fermented beverages  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 690159
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
Microaerophilic  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Compost
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

  You are going to add the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  You are going to remove permissions for the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  Changing the SP visibility will also change visibility on the following items:

 

Do you want to continue with this visibility change?

 

 

  Checking that this Sequencing Project can be made private:

 

Do you want to continue with this visibility change?