PROJECT INFORMATION
GOLD Project ID
Gp0001397  
Project Name
Erythrobacter sp. NAP1  
Other Names
  
Legacy ER Project ID
11302  
Legacy GOLD ID
Gi00841  
NCBI BioProject Name Erythrobacter sp. NAP1
NCBI BioProject ID 13512
NCBI BioProject Accession PRJNA13512
NCBI Locus Tag
NAP  
NCBI BioSample Accession SAMN02436135
PI Kobl┬┐zek M
Added By Nikos Kyrpides on 2007-11-27
Last Modified By JGI automated process on 2014-03-26
Project Comments
  
Project Status
Permanent Draft  
Project Relevance Marine Microbial Initiative (MMI)
Environmental
Sequencing Center J. Craig Venter Institute (JCVI) (USA)
Collaborating Institute Rutgers University (USA)
Funding Agency Gordon and Betty Moore Foundation Marine Microbiology Initiative (USA)
Project Description
Representative strain of open ocean aerobic anoxygenic photosynthetic bacteria; appears to be very abundant in some areas of the open ocean.  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Journal of bacteriology 193(20):5881-2 Genome sequence of the marine photoheterotrophic bacterium Erythrobacter sp. strain NAP1.
Other Publications
  
PROJECT COMPOSITION
Study Erythrobacter sp. NAP1
Organism Erythrobacter sp. NAP1
Analysis Projects Erythrobacter sp. NAP1
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 3: Improved-High-Quality Draft
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Sanger
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
61  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0001397
Organism Name
Erythrobacter sp. NAP1  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-ALPHA  
Genus
Erythrobacter  
Genus Synonyms
  
Species
Erythrobacter sp. NAP1  
Subspecies
  
Species Synonyms
  
Strain
NAP1  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 237727
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Alphaproteobacteria  
NCBI Order
Sphingomonadales  
NCBI Family
Erythrobacteraceae  
NCBI Genus
Erythrobacter  
NCBI Species
Erythrobacter sp. NAP1  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Marine  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
32  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases None
Known Habitats Marine
Surface water
Metabolisms
  
Phenotypes
  
Energy Sources Phototroph

 

 

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