PROJECT INFORMATION
GOLD Project ID
Gp0013718  
Project Name
Hymenobacter psychrotolerans DSM 18569  
Other Names
  
Legacy ER Project ID
20717  
Legacy GOLD ID
Gi11569  
NCBI BioProject Name Hymenobacter psychrotolerans DSM 18569
NCBI BioProject ID 245684
NCBI BioProject Accession PRJNA245684
NCBI Locus Tag
EJ61  
NCBI BioSample Accession SAMN02746009
PI Nikos Kyrpides
Added By JGI automated process on 2012-01-11
Last Modified By JGI automated process on 2018-10-08
Project Comments
  
Project Status
Permanent Draft  
Project Relevance Tree of Life
GEBA-KMG
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute Leibniz Institute (Germany)
Funding Agency U.S. Department of Energy (DOE) (USA)
Leibniz Institute (Germany)
Project Description
  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
PROJECT COMPOSITION
Study Genomic Encyclopedia of Type Strains, Phase I: the one thousand microbial genomes (KMG-I) project
Organism Hymenobacter psychrotolerans DSM 18569
Analysis Projects Hymenobacter psychrotolerans DSM 18569
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 1: Standard Draft
Finishing Goal Level 1: Standard Draft
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina
Illumina HiSeq 2500
Illumina HiSeq 2000
Library Method (MIGS-28)
Illumina Regular Fragment, 300bp, Plates  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0013718
Organism Name
Hymenobacter psychrotolerans DSM 18569  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
BACTEROIDETES  
Genus
Hymenobacter  
Genus Synonyms
  
Species
Hymenobacter psychrotolerans  
Subspecies
  
Species Synonyms
  
Strain
DSM 18569  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 18569  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.13368  
Exemplar Name
Hymenobacter psychrotolerans  
Taxon DOI
10.1601/tx.13368  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1121959
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Bacteroidetes  
NCBI Class
Cytophagia  
NCBI Order
Cytophagales  
NCBI Family
Hymenobacteraceae  
NCBI Genus
Hymenobacter  
NCBI Species
Hymenobacter psychrotolerans  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Terrestrial  
Ecosystem Type
Soil  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Permafrost  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 822636
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Rod-shaped  
Motility
Nonmotile  
Sporulation
Nonsporulating  
Temperature Range
Psychrotolerant  
Temperature Optimum
18 C  
Salinity
  
pH
5-10  
Cell Diameter
0.5 um  
Cell Length
0.8-1.7 um  
Color
  
Gram Staining
Gram-  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Permafrost sediment
Metabolisms
  
Phenotypes Catalase positive
Energy Sources
  

 

 

  You are going to add the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  You are going to remove permissions for the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  Changing the SP visibility will also change visibility on the following items:

 

Do you want to continue with this visibility change?

 

 

  Checking that this Sequencing Project can be made private:

 

Do you want to continue with this visibility change?