PROJECT INFORMATION
GOLD Project ID
Gp0134013  
Project Name
Tenacibaculum dicentrarchi AY7486TD  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Tenacibaculum dicentrarchi strain:AY7486TD
NCBI BioProject ID 305919
NCBI BioProject Accession PRJNA305919
NCBI Locus Tag
AUW17  
NCBI BioSample Accession SAMN04346845
PI Michelle Isbandi
Added By Michelle Isbandi on 2016-02-23
Last Modified By Supratim Mukherjee on 2017-01-12
Project Comments
  
Project Status
Complete and Published  
Project Relevance
  
Sequencing Center Macrogen (USA)
Collaborating Institute
  
Funding Agency
  
Project Description
Complete genome of Tenacibaculum dicentrarchi isolated from Atlantic salmon  
Is JGI Project
  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Tenacibaculum dicentrarchi AY7486TD
Organism Tenacibaculum dicentrarchi AY7486TD
Analysis Projects Tenacibaculum dicentrarchi AY7486TD
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) PacBio RS
Library Method (MIGS-28)
  
Number Of Reads
63904  
Read Size
2918253  
Vector
  
GC Percent
32  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0125715
Organism Name
Tenacibaculum dicentrarchi AY7486TD  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
BACTEROIDETES  
Genus
Tenacibaculum  
Genus Synonyms
  
Species
Tenacibaculum dicentrarchi  
Subspecies
  
Species Synonyms
  
Strain
AY7486TD  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 669041
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Bacteroidetes  
NCBI Class
Flavobacteriia  
NCBI Order
Flavobacteriales  
NCBI Family
Flavobacteriaceae  
NCBI Genus
Tenacibaculum  
NCBI Species
Tenacibaculum dicentrarchi  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Fish  
Ecosystem Type
Skin  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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