PROJECT INFORMATION
GOLD Project ID
Gp0012308  
Project Name
Thermus parvatiensis RLM  
Other Names
  
Legacy ER Project ID
5617  
Legacy GOLD ID
Gi10425  
NCBI BioProject Name Thermus parvatiensis strain:RLM
NCBI BioProject ID 71039
NCBI BioProject Accession PRJNA71039
NCBI Locus Tag
RLTM  
NCBI BioSample Accession SAMN02471718
PI
Added By JGI automated process on 2011-08-01
Last Modified By Galina Ovchinnikova on 2017-03-21
Project Comments
  
Project Status
Permanent Draft  
Project Relevance Medical
Sequencing Center University of Delhi (India)
Collaborating Institute
  
Funding Agency
  
Project Description
Thermus sp. RL Genome sequencing  
Is JGI Project
  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Journal of bacteriology 194(13):3534 Draft genome sequence of Thermus sp. strain RL, isolated from a hot water spring located atop the Himalayan ranges at Manikaran, India.

Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Thermus parvatiensis RLM
Organism Thermus parvatiensis RLM
Analysis Projects Thermus parvatiensis RLM
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Sanger
454 GS FLX Titanium
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
69  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0012308
Organism Name
Thermus parvatiensis RLM  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
DEINOCOCCUS-THERMUS  
Genus
Thermus  
Genus Synonyms
  
Species
Thermus parvatiensis  
Subspecies
  
Species Synonyms
  
Strain
RLM  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
MTCC 8932  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 456163
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Deinococcus-Thermus  
NCBI Class
Deinococci  
NCBI Order
Thermales  
NCBI Family
Thermaceae  
NCBI Genus
Thermus  
NCBI Species
Thermus parvatiensis  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Thermal springs  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
Thermophile  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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