PROJECT INFORMATION
GOLD Project ID
Gp0122411  
Project Name
Janthinobacterium sp. Ant5-2-1  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Janthinobacterium Genome sequencing and assembly
NCBI BioProject ID 293097
NCBI BioProject Accession PRJNA293097
NCBI Locus Tag
AN474  
NCBI BioSample Accession SAMN04231541
PI Asim K. Bej
Added By JGI automated process on 2015-10-15
Last Modified By Supratim Mukherjee on 2017-04-27
Project Comments
  
Project Status
Permanent Draft  
Project Relevance Environmental
Sequencing Center University of Alabama (USA)
Collaborating Institute
  
Funding Agency
  
Project Description
Janthinobacterium sp. Ant 5-2, a psychrotolerant gram-negative bacillus, isolated from a seasonally frozen Proglacial Lake Podprudnoye in Schirmacher Oasis of East Antarctica  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Genome announcements Draft Genome Sequence of Janthinobacterium sp. Ant5-2-1, Isolated from Proglacial Lake Podprudnoye in the Schirmacher Oasis of East Antarctica.

Other Publications
  
SRA Experiment
 
SRA Experiment Id SRX1430038
Experiment Title Draft Genome Sequence of Janthinobacterium sp. Ant5-2 Isolated from a Proglacial Lake Podprudnoye in Schirmacher Oasis of East Antarctica
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Layout PAIRED
Library Instrument ILLUMINA_MI_SEQ
Spot Length 500
PROJECT COMPOSITION
Study Janthinobacterium sp. Ant5-2-1
Organism Janthinobacterium sp. Ant5-2-1
Analysis Projects Janthinobacterium sp. Ant5-2-1
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 1: Standard Draft
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina MiSeq
Library Method (MIGS-28)
250bp Illumina  
Number Of Reads
2389439  
Read Size
6196351  
Vector
  
GC Percent
63  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0117471
Organism Name
Janthinobacterium sp. Ant5-2-1  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-BETA  
Genus
Janthinobacterium  
Genus Synonyms
  
Species
Janthinobacterium sp. Ant5-2-1  
Subspecies
  
Species Synonyms
  
Strain
Ant5-2-1  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1755239
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Betaproteobacteria  
NCBI Order
Burkholderiales  
NCBI Family
Oxalobacteraceae  
NCBI Genus
Janthinobacterium  
NCBI Species
Janthinobacterium sp. Ant5-2-1  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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