PROJECT INFORMATION
GOLD Project ID
Gp0120923  
Project Name
Edwardsiella ictaluri LADL11-194  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Edwardsiella ictaluri strain:LADL11-194
NCBI BioProject ID 285852
NCBI BioProject Accession PRJNA285852
NCBI Locus Tag
ACS33  
NCBI BioSample Accession SAMN03761503
PI
Added By JGI automated process on 2015-09-09
Last Modified By Supratim Mukherjee on 2017-03-29
Project Comments
  
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center Louisiana State University
Collaborating Institute
  
Funding Agency
  
Project Description
Edwardsiella ictaluri was first isolated from channel catfish in 1979. It was not until 2013, that zebrafish Danio rerio was reported as a natural host of Edwardsiella ictaluri infection. To investigate the potential mechanism of infection of zebrafish strain, here we sequenced the genomic DNA of edwardsiella ictaluri strain LADL11-194, isolated from a natural outbreak of edwardsiellosis in zebrafish Danio rerio.  
Is JGI Project
  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Genome sequencing of zebrafish pathogen Edwardsiella ictaluri
Organism Edwardsiella ictaluri LADL11-194
Analysis Projects Edwardsiella ictaluri LADL11-194
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Ion Torrent PGM
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0116500
Organism Name
Edwardsiella ictaluri LADL11-194  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-GAMMA  
Genus
Edwardsiella  
Genus Synonyms
  
Species
Edwardsiella ictaluri  
Subspecies
  
Species Synonyms
  
Strain
LADL11-194  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 67780
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Gammaproteobacteria  
NCBI Order
Enterobacterales  
NCBI Family
Hafniaceae  
NCBI Genus
Edwardsiella  
NCBI Species
Edwardsiella ictaluri  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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