PROJECT INFORMATION
GOLD Project ID
Gp0119878  
Project Name
Leptospirillum ferriphilum Sp-Cl  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Leptospirillum ferriphilum Genome sequencing
NCBI BioProject ID 290892
NCBI BioProject Accession PRJNA290892
NCBI Locus Tag
AOA54  
NCBI BioSample Accession SAMN03922415
PI Francisco Issotta
Added By Francisco Issotta on 2015-08-19
Last Modified By Hema Katta on 2019-01-04
Project Comments
  
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center Beckman Coulter, Inc. (USA)
Collaborating Institute
  
Funding Agency
  
Project Description
Draft genome sequence of choride-tolerant Leptospirillum ferriphilum Sp-Cl from industrial bioleaching operations in northern Chile  
Is JGI Project
  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Standards in genomic sciences Draft genome sequence of chloride-tolerant Leptospirillum ferriphilum Sp-Cl from industrial bioleaching operations in northern Chile.

Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Leptospirillum ferriphilum Sp-Cl
Organism Leptospirillum ferriphilum Sp-Cl
Analysis Projects Leptospirillum ferriphilum Sp-Cl
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 1: Standard Draft
Finishing Goal Level 4: Annotation Directed
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454 GS FLX
Library Method (MIGS-28)
GS FLX Titanium paired end libraries  
Number Of Reads
463056  
Read Size
250  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0115646
Organism Name
Leptospirillum ferriphilum Sp-Cl  
Other names (alias, synonyms, short names, common names)
PLS Parcela 21  
Organism Domain
BACTERIAL  
Phylogeny
NITROSPIRAE  
Genus
Leptospirillum  
Genus Synonyms
  
Species
Leptospirillum ferriphilum  
Subspecies
  
Species Synonyms
  
Strain
Sp-Cl  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 178606
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Nitrospirae  
NCBI Class
Nitrospira  
NCBI Order
Nitrospirales  
NCBI Family
Nitrospiraceae  
NCBI Genus
Leptospirillum  
NCBI Species
Leptospirillum ferriphilum  
ISOLATION CLASSIFICATION
Ecosystem
Engineered  
Ecosystem Category
Built environment  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
25-45 C  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

  You are going to add the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  You are going to remove permissions for the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  Changing the SP visibility will also change visibility on the following items:

 

Do you want to continue with this visibility change?

 

 

  Checking that this Sequencing Project can be made private:

 

Do you want to continue with this visibility change?