PROJECT INFORMATION
GOLD Project ID
Gp0119386  
Project Name
Paracoccus sp. 361  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Paracoccus sp. 361
NCBI BioProject ID 272835
NCBI BioProject Accession PRJNA272835
NCBI Locus Tag
SY26  
NCBI BioSample Accession SAMN03287307
PI
Added By JGI automated process on 2015-07-15
Last Modified By Supratim Mukherjee on 2017-03-29
Project Comments
  
Project Status
Permanent Draft  
Project Relevance Environmental
Sequencing Center University of Gdansk
Collaborating Institute
  
Funding Agency
  
Project Description
Baltic Sea constitutes a unique environment of brackish water conditions, with a significant influence of seasonal freshwater deposits and of agricultural and industrial pollution from the surrounding lands. This challenging ecological niche leads to bacterial adaptation to diverse stress conditions. The long-term goal of this project is to identify molecular mechanisms that govern stress responses and fitness advantages of Baltic Sea bacteria in a number of stress conditions previously reported by The Baltic Marine Environment Protection Commission (HELCOM) to affect the Baltic Sea biodiversity. To achieve this goal, bacterial species isolated from the Gulf of Gdansk, a southeastern bay of the Baltic Sea region, are analyzed at the genome, transcriptome and proteome levels.  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
PROJECT COMPOSITION
Study Genome sequence of microbial strains isolated from the Gulf of Gdansk
Organism Paracoccus sp. 361
Analysis Projects Paracoccus sp. 361
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina HiSeq
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0115437
Organism Name
Paracoccus sp. 361  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-ALPHA  
Genus
Paracoccus  
Genus Synonyms
  
Species
Paracoccus sp. 361  
Subspecies
  
Species Synonyms
  
Strain
361  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1192054
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Alphaproteobacteria  
NCBI Order
Rhodobacterales  
NCBI Family
Rhodobacteraceae  
NCBI Genus
Paracoccus  
NCBI Species
Paracoccus sp. 228  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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