PROJECT INFORMATION
GOLD Project ID
Gp0011937  
Project Name
Edwardsiella tarda DT  
Other Names
  
Legacy ER Project ID
5054  
Legacy GOLD ID
Gi09924  
NCBI BioProject Name Edwardsiella tarda DT
NCBI BioProject ID 66369
NCBI BioProject Accession PRJNA66369
NCBI Locus Tag
ETDT  
NCBI BioSample Accession SAMN02469760
PI
Added By JGI automated process on 2011-07-14
Last Modified By JGI automated process on 2014-03-26
Project Comments
  
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center East China University of Science and Technology (China)
Collaborating Institute
  
Funding Agency
  
Project Description
Edwardsiella tarda DT genome sequencing  
Is JGI Project
  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications PloS one 7(5):e36987 Edwardsiella comparative phylogenomics reveal the new intra/inter-species taxonomic relationships, virulence evolution and niche adaptation mechanisms.

Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Edwardsiella tarda DT
Organism Edwardsiella tarda DT
Analysis Projects Edwardsiella tarda DT
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454 GS FLX Titanium
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
57  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0011937
Organism Name
Edwardsiella tarda DT  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-GAMMA  
Genus
Edwardsiella  
Genus Synonyms
  
Species
Edwardsiella tarda  
Subspecies
  
Species Synonyms
  
Strain
DT  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
No  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1027364
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Gammaproteobacteria  
NCBI Order
Enterobacterales  
NCBI Family
Hafniaceae  
NCBI Genus
Edwardsiella  
NCBI Species
Edwardsiella tarda  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Fish  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
Anaerobe  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases Gastroenteritis
Diarrhea
Known Habitats Fish
Gut of the body louse
Fresh water
Metabolisms Lactose fermenting
Phenotypes
  
Energy Sources
  

 

 

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