PROJECT INFORMATION
GOLD Project ID
Gp0117770  
Project Name
Flavobacterium psychrophilum 4  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Flavobacterium psychrophilum
NCBI BioProject ID 272759
NCBI BioProject Accession PRJNA272759
NCBI Locus Tag
SU65  
NCBI BioSample Accession SAMN02941919
PI
Added By JGI automated process on 2015-07-02
Last Modified By
Project Comments
  
Project Status
Complete and Published  
Project Relevance Agricultural
Sequencing Center University of Copenhagen (Denmark)
Collaborating Institute
  
Funding Agency
  
Project Description
Genome comparison among Flavobacterium psychrophilum isolates from diferrent geographic locations. the objetive is the description of prophages, virulence factors and the analysis of pan genome.  
Is JGI Project
  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Flavobacterium psychrophilum strain:4 Genome sequencing
Organism Flavobacterium psychrophilum 4
Analysis Projects Flavobacterium psychrophilum 4
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0102391
Organism Name
Flavobacterium psychrophilum 4  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
BACTEROIDETES  
Genus
Flavobacterium  
Genus Synonyms
  
Species
Flavobacterium psychrophilum  
Subspecies
  
Species Synonyms
  
Strain
4  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 96345
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Bacteroidetes  
NCBI Class
Flavobacteriia  
NCBI Order
Flavobacteriales  
NCBI Family
Flavobacteriaceae  
NCBI Genus
Flavobacterium  
NCBI Species
Flavobacterium psychrophilum  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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