PROJECT INFORMATION
GOLD Project ID
Gp0117762  
Project Name
Eubacterium limosum ATCC 8486  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Eubacterium limosum
NCBI BioProject ID 270275
NCBI BioProject Accession PRJNA270275
NCBI Locus Tag
RP21  
NCBI BioSample Accession SAMN03265381
PI
Added By JGI automated process on 2015-07-02
Last Modified By Supratim Mukherjee on 2017-03-29
Project Comments
  
Project Status
Complete and Published  
Project Relevance Model Organism
Sequencing Center Korean Advanced Institute of Science and Technology
Collaborating Institute
  
Funding Agency
  
Project Description
Eubacterium limosum ATCC 8486 is a model strain for Eubacterium limosum, which ferment syngas.  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
PROJECT COMPOSITION
Study Eubacterium limosum strain:ATCC 8486 Genome sequencing
Organism Eubacterium limosum ATCC 8486
Analysis Projects Eubacterium limosum ATCC 8486
Eubacterium limosum ATCC 8486
Number of Analysis Projects 2
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) PacBio RS
Illumina MiSeq
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0032682
Organism Name
Eubacterium limosum ATCC 8486  
Other names (alias, synonyms, short names, common names)
DSM 20543, ATCC 8486, NCIB 9763, Type  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Eubacterium  
Genus Synonyms
  
Species
Eubacterium limosum  
Subspecies
  
Species Synonyms
  
Strain
ATCC 8486  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
ATCC 8486  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.4229  
Exemplar Name
Eubacterium limosum ATCC 8486  
Taxon DOI
10.1601/tx.4229  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1736
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Firmicutes  
NCBI Class
Clostridia  
NCBI Order
Clostridiales  
NCBI Family
Eubacteriaceae  
NCBI Genus
Eubacterium  
NCBI Species
Eubacterium limosum  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Sediment  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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