PROJECT INFORMATION
GOLD Project ID
Gp0117580  
Project Name
Clostridium pasteurianum DSM 525 = ATCC 6013  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Clostridium pasteurianum DSM 525 = ATCC 6013
NCBI BioProject ID 258199
NCBI BioProject Accession PRJNA258199
NCBI Locus Tag
CLPA  
NCBI BioSample Accession SAMN02990135
PI
Added By JGI automated process on 2015-07-02
Last Modified By
Project Comments
  
Project Status
Complete and Published  
Project Relevance Industrial
Sequencing Center Goettingen Genomics Laboratory (Germany)
Collaborating Institute
  
Funding Agency
  
Project Description
Clostridium pasteurianum is a gram positive, endospore-forming, obligately anaerobic rod shaped bacterium that fixes atmospheric nitrogen. It can efficiently utilise glycerol as a feedstock to produce the fuels n-butanol and 1,3-propanediol. The species was discovered (1893-95) in soil by the Russian microbiologist Winogradsky. The strain described here was obtained from the DSMZ.  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
PROJECT COMPOSITION
Study Clostridium pasteurianum DSM 525 = ATCC 6013 Genome sequencing
Organism Clostridium pasteurianum DSM 525, ATCC 6013
Analysis Projects Clostridium pasteurianum DSM 525 = ATCC 6013
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Sanger
Illumina
454
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0019309
Organism Name
Clostridium pasteurianum DSM 525, ATCC 6013  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Clostridium  
Genus Synonyms
  
Species
Clostridium pasteurianum  
Subspecies
  
Species Synonyms
  
Strain
5  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 525  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.3988  
Exemplar Name
Clostridium pasteurianum DSM 525  
Taxon DOI
10.1601/tx.3988  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1262449
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Firmicutes  
NCBI Class
Clostridia  
NCBI Order
Clostridiales  
NCBI Family
Clostridiaceae  
NCBI Genus
Clostridium  
NCBI Species
Clostridium pasteurianum  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Terrestrial  
Ecosystem Type
Soil  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
Anaerobe  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
Sporulating  
Temperature Range
Mesophile  
Temperature Optimum
30-34  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Singles
Pairs
Diseases
  
Known Habitats Soil
Metabolisms Nitrogen fixer- anaerobic
Phenotypes
  
Energy Sources
  

 

 

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