PROJECT INFORMATION
GOLD Project ID
Gp0117544  
Project Name
Carnobacterium sp. CP1  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Carnobacterium sp. CP1
NCBI BioProject ID 264769
NCBI BioProject Accession PRJNA264769
NCBI Locus Tag
NY10  
NCBI BioSample Accession SAMN03140695
PI
Added By JGI automated process on 2015-07-02
Last Modified By Hema Katta on 2018-02-16
Project Comments
  
Project Status
Complete and Published  
Project Relevance Environmental
Sequencing Center Zhejiang Wanli University
Collaborating Institute
  
Funding Agency
  
Project Description
Clones of Carnobacterium sp. strain CP1 were haemolytic, its virulence factors is not known. To detect the genes responsible forhaemolysis we performed genome sequence of the haemolytic Carnobacterium strain CP1  
Is JGI Project
  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Genome announcements Complete Genome Sequence of Hemolysin-Containing Carnobacterium sp. Strain CP1 Isolated from the Antarctic.

Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Carnobacterium sp. CP1 Genome sequencing
Organism Carnobacterium sp. CP1
Analysis Projects Carnobacterium sp. CP1
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0113875
Organism Name
Carnobacterium sp. CP1  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Carnobacterium  
Genus Synonyms
  
Species
Carnobacterium sp. CP1  
Subspecies
  
Species Synonyms
  
Strain
CP1  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1564681
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Firmicutes  
NCBI Class
Bacilli  
NCBI Order
Lactobacillales  
NCBI Family
Carnobacteriaceae  
NCBI Genus
Carnobacterium  
NCBI Species
Carnobacterium sp. CP1  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

  You are going to add the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  You are going to remove permissions for the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  Changing the SP visibility will also change visibility on the following items:

 

Do you want to continue with this visibility change?

 

 

  Checking that this Sequencing Project can be made private:

 

Do you want to continue with this visibility change?