PROJECT INFORMATION
GOLD Project ID
Gp0117413  
Project Name
Bacillus methylotrophicus JJ-D34  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Bacillus methylotrophicus
NCBI BioProject ID 282546
NCBI BioProject Accession PRJNA282546
NCBI Locus Tag
AAV29  
NCBI BioSample Accession SAMN03571251
PI
Added By JGI automated process on 2015-07-02
Last Modified By
Project Comments
  
Project Status
Complete and Published  
Project Relevance
  
Sequencing Center Chung-Ang University (South Korea)
Collaborating Institute
  
Funding Agency
  
Project Description
Genomic analysis of Bacillus methylotrophicus JJ-D34  
Is JGI Project
  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Bacillus methylotrophicus strain:JJ-D34 Genome sequencing
Organism Bacillus methylotrophicus JJ-D34
Analysis Projects Bacillus methylotrophicus JJ-D34
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) PacBio RS
Illumina MiSeq
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0112382
Organism Name
Bacillus methylotrophicus JJ-D34  
Other names (alias, synonyms, short names, common names)
Genomic analysis of Bacillus methylotrophicus JJ-D34 - Starter candidate for low-salt doenjang fermentation   
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Bacillus  
Genus Synonyms
  
Species
Bacillus methylotrophicus  
Subspecies
  
Species Synonyms
  
Strain
JJ-D34  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 492670
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Firmicutes  
NCBI Class
Bacilli  
NCBI Order
Bacillales  
NCBI Family
Bacillaceae  
NCBI Genus
Bacillus  
NCBI Species
Bacillus velezensis  
ISOLATION CLASSIFICATION
Ecosystem
Engineered  
Ecosystem Category
Food production  
Ecosystem Type
Fermented vegetables  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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