PROJECT INFORMATION
GOLD Project ID
Gp0011587  
Project Name
Pseudomonas fluorescens Q2-87  
Other Names
  
Legacy ER Project ID
5390  
Legacy GOLD ID
Gi10260  
NCBI BioProject Name Pseudomonas fluorescens Q2-87
NCBI BioProject ID 67535
NCBI BioProject Accession PRJNA67535
NCBI Locus Tag
PFLQ2  
NCBI BioSample Accession
PI
Added By JGI automated process on 2011-07-14
Last Modified By JGI automated process on 2014-03-26
Project Comments
  
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center U.S. Department of Agriculture (France)
Collaborating Institute Macquarie University (Australia)
Washington State University (USA)
J. Craig Venter Institute (JCVI) (USA)
Funding Agency
  
Project Description
Pseudomonas fluorescens Q2-87 genome sequencing  
Is JGI Project
  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications PLoS genetics 8(7):e1002784 Comparative genomics of plant-associated Pseudomonas spp.: insights into diversity and inheritance of traits involved in multitrophic interactions.
Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Pseudomonas fluorescens Q2-87
Organism Pseudomonas fluorescens Q2-87
Analysis Projects Pseudomonas fluorescens Q2-87
Number of Analysis Projects 1
Number of DAPs
6  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 3: Improved-High-Quality Draft
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Sanger
454
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
61  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0011587
Organism Name
Pseudomonas fluorescens Q2-87  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-GAMMA  
Genus
Pseudomonas  
Genus Synonyms
  
Species
Pseudomonas fluorescens  
Subspecies
  
Species Synonyms
  
Strain
Q2-87  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
No  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1038922
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Gammaproteobacteria  
NCBI Order
Pseudomonadales  
NCBI Family
Pseudomonadaceae  
NCBI Genus
Pseudomonas  
NCBI Species
Pseudomonas fluorescens  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Plants  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
Obligate aerobe  
Cell Shape
Rod-shaped  
Motility
  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
25-30C  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Soil
Metabolisms Nitrogen fixer- aerobic
Phenotypes
  
Energy Sources
  

 

 

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