PROJECT INFORMATION
GOLD Project ID
Gp0115749  
Project Name
Massilia sp. WF1  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Massilia sp. WF1 Genome sequencing and assembly
NCBI BioProject ID 285947
NCBI BioProject Accession PRJNA285947
NCBI Locus Tag
AB595  
NCBI BioSample Accession SAMN03763311
PI Jun Lou
Added By Jun Lou on 2015-06-05
Last Modified By Supratim Mukherjee on 2017-03-29
Project Comments
  
Project Status
Permanent Draft  
Project Relevance Environmental
Sequencing Center Zhejiang University (China)
Collaborating Institute
  
Funding Agency
  
Project Description
High quality genome sequence of a efficient PHE-degrading Massilia sp. strain WF1  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
PROJECT COMPOSITION
Study Massilia sp. WF1
Organism Massilia sp. WF1
Analysis Projects Massilia sp. WF1
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 5: Non-contiguous Finished
Finishing Goal Level 6: Finished
Sequencing Comments
PacBio RS + Illumina HiSeq2500  
Sequencing Technology (MIGS-29) PacBio RS
Illumina HiSeq
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
6.08  
Vector
  
GC Percent
66  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0112825
Organism Name
Massilia sp. WF1  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA  
Genus
Massilia  
Genus Synonyms
  
Species
Massilia sp. WF1  
Subspecies
  
Species Synonyms
  
Strain
WF1  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1406431
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Betaproteobacteria  
NCBI Order
Burkholderiales  
NCBI Family
Oxalobacteraceae  
NCBI Genus
Massilia  
NCBI Species
Massilia sp. WF1  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Terrestrial  
Ecosystem Type
Soil  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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