PROJECT INFORMATION
GOLD Project ID
Gp0113001  
Project Name
Aliiroseovarius crassostreae DSM 16950  
Other Names
Roseovarius crassostreae DSM 16950  
Legacy GOLD ID
  
NCBI BioProject Name Roseovarius crassostreae DSM 16950
NCBI BioProject ID 303585
NCBI BioProject Accession PRJNA303585
NCBI Locus Tag
ATI71  
NCBI BioSample Accession SAMN04488527
PI Markus Göker
Added By JGI automated process on 2015-04-06
Last Modified By JGI automated process on 2018-10-08
Project Comments
  
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Genomic Encyclopedia of Archaeal and Bacterial Type Strains, Phase II: from individual species to whole genera  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
PROJECT COMPOSITION
Study Genomic Encyclopedia of Archaeal and Bacterial Type Strains, Phase II (KMG-II): from individual species to whole genera
Organism Aliiroseovarius crassostreae DSM 16950
Analysis Projects Aliiroseovarius crassostreae DSM 16950
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 1: Standard Draft
Finishing Goal Level 1: Standard Draft
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina HiSeq 2500-1TB
Illumina HiSeq 2500
Library Method (MIGS-28)
Illumina Regular Fragment, 300bp, Plates  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0027766
Organism Name
Aliiroseovarius crassostreae DSM 16950  
Other names (alias, synonyms, short names, common names)
Roseovarius crassostreae DSM 16950  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-ALPHA  
Genus
Aliiroseovarius  
Genus Synonyms
Roseovarius  
Species
Aliiroseovarius crassostreae  
Subspecies
  
Species Synonyms
  
Strain
DSM 16950  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 16950  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.9525  
Exemplar Name
Aliiroseovarius crassostreae  
Taxon DOI
10.1601/tx.27093  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 154981
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Alphaproteobacteria  
NCBI Order
Rhodobacterales  
NCBI Family
Rhodobacteraceae  
NCBI Genus
Aliiroseovarius  
NCBI Species
Aliiroseovarius crassostreae  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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