PROJECT INFORMATION
GOLD Project ID
Gp0112584  
Project Name
Paracoccus halophilus CGMCC 1.6117  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Paracoccus halophilus CGMCC 1.6117
NCBI BioProject ID 303540
NCBI BioProject Accession PRJNA303540
NCBI Locus Tag
ATI26  
NCBI BioSample Accession SAMN04487972
PI William Whitman
Added By JGI automated process on 2015-04-01
Last Modified By JGI automated process on 2019-03-07
Project Comments
  
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Genomic Encyclopedia of Type Strains, Phase III the genomes of soil and plant-associated and newly described type strains  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
PROJECT COMPOSITION
Study Genomic Encyclopedia of Type Strains, Phase III (KMG-III): the genomes of soil and plant-associated and newly described type strains
Organism Paracoccus halophilus CGMCC 1.6117
Analysis Projects Paracoccus halophilus CGMCC 1.6117
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 1: Standard Draft
Finishing Goal Level 1: Standard Draft
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina HiSeq 2500-1TB
Library Method (MIGS-28)
Illumina Regular Fragment, 300bp, Plates  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0111107
Organism Name
Paracoccus halophilus CGMCC 1.6117  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-ALPHA  
Genus
Paracoccus  
Genus Synonyms
  
Species
Paracoccus halophilus  
Subspecies
  
Species Synonyms
  
Strain
CGMCC 1.6117  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
CGMCC 1.6117  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.13519  
Exemplar Name
Paracoccus halophilus  
Taxon DOI
10.1601/tx.13519  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 376733
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Alphaproteobacteria  
NCBI Order
Rhodobacterales  
NCBI Family
Rhodobacteraceae  
NCBI Genus
Paracoccus  
NCBI Species
Paracoccus halophilus  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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