PROJECT INFORMATION
GOLD Project ID
Gp0110151  
Project Name
Aequorivita aquimaris D-24  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Vitellibacter aquimaris strain:D-24
NCBI BioProject ID 261777
NCBI BioProject Accession PRJNA261777
NCBI Locus Tag
LS48  
NCBI BioSample Accession SAMN03075687
PI Chun Shiong Chong
Added By Chun Shiong Chong on 2015-02-06
Last Modified By Supratim Mukherjee on 2019-02-26
Project Comments
  
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center University of Technology, Malaysia (Malaysia)
Collaborating Institute
  
Funding Agency
  
Project Description
Genome sequencing of a marine bacterium  
Is JGI Project
  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Vitellibacter aquimaris D-24
Organism Aequorivita aquimaris D-24
Analysis Projects Aequorivita aquimaris D-24
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 2: High-Quality Draft
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina MiSeq
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0109752
Organism Name
Aequorivita aquimaris D-24  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
BACTEROIDETES  
Genus
Aequorivita  
Genus Synonyms
  
Species
Aequorivita aquimaris  
Subspecies
  
Species Synonyms
  
Strain
D-24  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.28982  
Exemplar Name
Vitellibacter aquimaris  
Taxon DOI
10.1601/tx.28982  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1548749
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Bacteroidetes  
NCBI Class
Flavobacteriia  
NCBI Order
Flavobacteriales  
NCBI Family
Flavobacteriaceae  
NCBI Genus
Aequorivita  
NCBI Species
Vitellibacter aquimaris  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Marine  
Ecosystem Subtype
Coastal  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID KM569673
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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