PROJECT INFORMATION
GOLD Project ID
Gp0010969  
Project Name
Streptococcus pyogenes I123  
Other Names
  
Legacy ER Project ID
19530  
Legacy GOLD ID
Gi09534  
NCBI BioProject Name Streptococcus pyogenes I123
NCBI BioProject ID 64463
NCBI BioProject Accession PRJNA64463
NCBI Locus Tag
GA3  
NCBI BioSample Accession
PI
Added By Ionna Pagani on 2011-04-13
Last Modified By Tatiparthi Reddy on 2012-02-10
Project Comments
  
Project Status
incomplete  
Project Relevance Pathogen
Medical
Sequencing Center Free University of Brussels (Belgium)
Collaborating Institute
  
Funding Agency
  
Project Description
This organism is a member of the normal human nasopharyngeal flora. S. pyogenes is a group A streptococcus and is the leading cause of uncomplicated bacterial pharyngitis and tonsillitis. Infections can also result in sinusitis, otitis, mastoiditis, pneumonia with empyema, joint or bone infections, necrotizing fasciitis or myositis, and, more infrequently, in meningitis or endocarditis. S. pyogenes infections of the skin can be superficial (impetigo) or deep (cellulitis). This organism is commonly referred to by the lay press as flesh eating bacteria.  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Streptococcus pyogenes I123
Organism Streptococcus pyogenes I123
Analysis Projects
  
Number of Analysis Projects 0
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status In progress
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0010969
Organism Name
Streptococcus pyogenes I123  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Streptococcus  
Genus Synonyms
  
Species
Streptococcus pyogenes  
Subspecies
  
Species Synonyms
  
Strain
I123  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 999383
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Firmicutes  
NCBI Class
Bacilli  
NCBI Order
Lactobacillales  
NCBI Family
Streptococcaceae  
NCBI Genus
Streptococcus  
NCBI Species
Streptococcus pyogenes  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Unclassified  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
Anaerobe  
Cell Shape
Coccus-shaped  
Motility
  
Sporulation
  
Temperature Range
Mesophile  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases Endocarditis
Pneumonia
Meningitis
Tonsillitis
Mastitis
Otitis
Pharyngitis
Known Habitats Host
Human airways
Metabolisms
  
Phenotypes Pathogen
Energy Sources
  

 

 

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