PROJECT INFORMATION
GOLD Project ID
Gp0109673  
Project Name
Alteromonas marina AD001  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Coastal marine bacteria genome sequencing
NCBI BioProject ID 269560
NCBI BioProject Accession PRJNA269560
NCBI Locus Tag
RJ41  
NCBI BioSample Accession SAMN03254451
PI Tan Guan Sheng Adrian
Added By Tan Guan Sheng Adrian on 2015-01-06
Last Modified By Supratim Mukherjee on 2017-03-29
Project Comments
  
Project Status
Permanent Draft  
Project Relevance Environmental
Sequencing Center University of Malaya (Malaysia)
Collaborating Institute
  
Funding Agency
  
Project Description
Genome sequencing of coastal marine Alteromonas marina AD001  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
PROJECT COMPOSITION
Study Coastal marine bacteria genome sequencing
Organism Alteromonas marina JCM 11804
Analysis Projects Alteromonas marina AD001
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina HiSeq 2500
Library Method (MIGS-28)
Illumina Nextera DNA  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0026705
Organism Name
Alteromonas marina JCM 11804  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-GAMMA  
Genus
Alteromonas  
Genus Synonyms
  
Species
Alteromonas marina  
Subspecies
  
Species Synonyms
  
Strain
JCM 11804  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
JCM 11804  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.2822  
Exemplar Name
Alteromonas marina JCM 11804  
Taxon DOI
10.1601/tx.2822  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 203795
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Gammaproteobacteria  
NCBI Order
Alteromonadales  
NCBI Family
Alteromonadaceae  
NCBI Genus
Alteromonas  
NCBI Species
Alteromonas marina  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Marine  
Ecosystem Subtype
Coastal  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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