PROJECT INFORMATION
GOLD Project ID
Gp0109672  
Project Name
Photobacterium gaetbulicola AD005a  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Coastal marine bacteria genome sequencing
NCBI BioProject ID 269560
NCBI BioProject Accession PRJNA269560
NCBI Locus Tag
RJ45  
NCBI BioSample Accession SAMN03254454
PI Tan Guan Sheng Adrian
Added By Tan Guan Sheng Adrian on 2015-01-06
Last Modified By Supratim Mukherjee on 2017-03-29
Project Comments
  
Project Status
Permanent Draft  
Project Relevance Environmental
Sequencing Center University of Malaya (Malaysia)
Collaborating Institute
  
Funding Agency
  
Project Description
Genome sequencing of coastal marine Photobacterium gaetbulicola AD005a  
Is JGI Project
  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Coastal marine bacteria genome sequencing
Organism Photobacterium gaetbulicola Gung47
Analysis Projects Photobacterium gaetbulicola AD005a
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina MiSeq
Library Method (MIGS-28)
Illumina Nextera DNA  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0036049
Organism Name
Photobacterium gaetbulicola Gung47  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA  
Genus
Photobacterium  
Genus Synonyms
  
Species
Photobacterium gaetbulicola  
Subspecies
  
Species Synonyms
  
Strain
Gung47  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
CCUG 58399  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.20217  
Exemplar Name
Photobacterium gaetbulicola  
Taxon DOI
10.1601/tx.20217  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 658445
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Gammaproteobacteria  
NCBI Order
Vibrionales  
NCBI Family
Vibrionaceae  
NCBI Genus
Photobacterium  
NCBI Species
Photobacterium gaetbulicola  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Marine  
Ecosystem Subtype
Coastal  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Intertidal sediment
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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