PROJECT INFORMATION
GOLD Project ID
Gp0107363  
Project Name
Halopiger salifodinae KCY07-B2  
Other Names
  
Legacy ER Project ID
79167  
Legacy GOLD ID
Gi0079167  
NCBI BioProject Name Halopiger salifodinae
NCBI BioProject ID 261874
NCBI BioProject Accession PRJNA261874
NCBI Locus Tag
LT39  
NCBI BioSample Accession SAMN03077632
PI
Added By JGI automated process on 2014-10-02
Last Modified By Mahrukh Mujeeb on 2017-07-06
Project Comments
  
Project Status
Permanent Draft  
Project Relevance Environmental
Sequencing Center Zhejiang University (China)
Collaborating Institute
  
Funding Agency
  
Project Description
Halopiger salifodinae strain KCY07-B2, whole genome Illumina sequencing project.  
Is JGI Project
  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Standards in genomic sciences Draft genome sequence of Halopiger salifodinae KCY07-B2(T), an extremly halophilic archaeon isolated from a salt mine.
Other Publications
  
PROJECT COMPOSITION
Study Halopiger salifodinae Genome sequencing
Organism Halopiger salifodinae KCY07-B2
Analysis Projects Halopiger salifodinae KCY07-B2
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 1: Standard Draft
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0107363
Organism Name
Halopiger salifodinae KCY07-B2  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
ARCHAEAL  
Phylogeny
EURYARCHAEOTA-HALOBACTERIA  
Genus
Halopiger  
Genus Synonyms
  
Species
Halopiger salifodinae  
Subspecies
  
Species Synonyms
  
Strain
KCY07-B2  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.24566  
Exemplar Name
Halopiger salifodinae  
Taxon DOI
10.1601/tx.24566  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1202768
NCBI Superkingdom
Archaea  
NCBI Kingdom
  
NCBI Phylum
Euryarchaeota  
NCBI Class
Halobacteria  
NCBI Order
Natrialbales  
NCBI Family
Natrialbaceae  
NCBI Genus
Halopiger  
NCBI Species
Halopiger salifodinae  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
Rod-shaped  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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