PROJECT INFORMATION
GOLD Project ID
Gp0104617  
Project Name
Clostridium acetobutylicum ATCC 824  
Other Names
  
Legacy ER Project ID
78048  
Legacy GOLD ID
  
NCBI BioProject Name
  
NCBI BioProject ID 262199
NCBI BioProject Accession PRJNA262199
NCBI Locus Tag
  
NCBI BioSample Accession
PI Adam Guss
Added By JGI automated process on 2014-09-19
Last Modified By JGI automated process on 2019-04-28
Project Comments
  
Project Status
incomplete  
Project Relevance
  
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
PacBio sequencing to determine microbial DNA methylation  
Is JGI Project
Yes  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Methylation  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study PacBio sequencing to determine microbial DNA methylation
Organism Clostridium acetobutylicum ATCC 824
Analysis Projects
  
Number of Analysis Projects 0
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) PacBio RS
PacBio RS II
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0000725
Organism Name
Clostridium acetobutylicum ATCC 824  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Clostridium  
Genus Synonyms
  
Species
Clostridium acetobutylicum  
Subspecies
  
Species Synonyms
  
Strain
ATCC 824  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
ATCC 824  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.3883  
Exemplar Name
Clostridium acetobutylicum  
Taxon DOI
10.1601/tx.3883  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 272562
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Firmicutes  
NCBI Class
Clostridia  
NCBI Order
Clostridiales  
NCBI Family
Clostridiaceae  
NCBI Genus
Clostridium  
NCBI Species
Clostridium acetobutylicum  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Terrestrial  
Ecosystem Type
Soil  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 7818
Genbank 16S ID U17030
GENERAL PROPERTIES
Oxygen Requirement
Anaerobe  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
Sporulating  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Singles
Pairs
Diseases None
Known Habitats Soil
Host
Fresh water
Metabolisms Gelatin hydrolysis positive
Phenotypes
  
Energy Sources Chemoorganotroph

 

 

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