PROJECT INFORMATION
GOLD Project ID
Gp0101983  
Project Name
Peptoniphilus obesi ph1  
Other Names
  
Legacy ER Project ID
76756  
Legacy GOLD ID
Gi0076756  
NCBI BioProject Name Grassa massiliensis
NCBI BioProject ID 183093
NCBI BioProject Accession PRJEB221
NCBI Locus Tag
BN195  
NCBI BioSample Accession
PI
Added By JGI automated process on 2014-08-08
Last Modified By
Project Comments
  
Project Status
incomplete  
Project Relevance
  
Sequencing Center Aix-Marseille University (France)
Collaborating Institute
  
Funding Agency
  
Project Description
Grassa massiliensis (Synonym Peptostreptococcaceae bacterium) strain ph1 sp. nov. is the type strain of Grassa massiliensis sp. nov., a new species within the genus Peptostreptococcaceae. This strain, whose genome is described here, was isolated from the fecal flora of a healthy patient. G. massiliensis is an anaerobic cocci. Here we describe the features of this organism, together with the complete genome sequence and annotation. The 1,774,150 bp long genome (1 chromosome but no plasmid) contains 1,689 protein-coding and 29 RNA genes, including 5 rRNA genes.  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
PROJECT COMPOSITION
Study Non contiguous-finished genome sequence and description of Grassa massiliensis sp. nov.
Organism Peptoniphilus obesi ph1
Analysis Projects
  
Number of Analysis Projects 0
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status In progress
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0037296
Organism Name
Peptoniphilus obesi ph1  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Peptoniphilus  
Genus Synonyms
  
Species
Peptoniphilus obesi  
Subspecies
  
Species Synonyms
  
Strain
ph1  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 25489  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.24638  
Exemplar Name
Peptoniphilus obesi  
Taxon DOI
10.1601/tx.24638  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1118062
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Firmicutes  
NCBI Class
Tissierellia  
NCBI Order
Tissierellales  
NCBI Family
Peptoniphilaceae  
NCBI Genus
Peptoniphilus  
NCBI Species
Peptoniphilus obesi  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Human  
Ecosystem Type
Digestive system  
Ecosystem Subtype
Large intestine  
Specific Ecosystem
Fecal  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
Anaerobe  
Cell Shape
Coccus-shaped  
Motility
Nonmotile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
37  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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