ORGANISM INFORMATION | |
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GOLD Organism ID |
Go0020870 |
Organism Name
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Bacteroides xylanisolvens NLAE-zl-C29 |
Other Names |
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Common Name |
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NCBI Taxonomy ID
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371601 |
Domain |
BACTERIAL |
Phylum |
BACTEROIDETES |
Genus
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Bacteroides |
Genus Synonyms |
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Species
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Bacteroides xylanisolvens |
Species Synonyms |
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Serovar/Cultivar |
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Strain |
NLAE-zl-C29 |
Subspecies |
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Type Strain |
No |
Culture Collection |
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Organism Type |
Natural |
Cultured |
Yes |
Culture Type |
Isolate |
Comments |
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Biosafety Level |
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Taxon DOI
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Exemplar DOI
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Exemplar Name
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Genbank 16S ID |
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Is Public |
Yes |
Related Sequencing Projects |
1 |
Related Analysis Projects |
1 |
NCBI TAXONOMY | |
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NCBI Organism Name |
Bacteroides xylanisolvens |
NCBI Tax ID
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371601 |
NCBI Superkingdom |
Bacteria |
NCBI Kingdom |
|
NCBI Phylum |
Bacteroidetes |
NCBI Class |
Bacteroidia |
NCBI Order |
Bacteroidales |
NCBI Family |
Bacteroidaceae |
NCBI Genus |
Bacteroides |
NCBI Species |
Bacteroides xylanisolvens |
ORGANISM METADATA | |
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Cell Diameter |
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Cell Shape |
Rod-shaped |
Color |
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Gram Stain |
Gram- |
Motility |
Nonmotile |
Oxygen Requirement (MIGS-22) |
Anaerobe |
pH |
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Salinity (MIGS-6.3) |
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Pressure |
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Sporulation |
Nonsporulating |
Carbon Source
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Biotic Relationships (MIGS-14) |
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Temperature Range |
Mesophile |
Growth Temperature |
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Cell Length |
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Commercial Strain |
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Commercial Strain Comments |
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Cell Arrangements |
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Diseases (MIGS-15) |
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Habitats (MIGS-6) |
Host Animal gastrointestinal tract |
Metabolism |
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Phenotypes |
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Energy Sources |
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Body Products |
Feces |
COLLECTION DATE | |
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Collection Date
(MIGS-5)
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ORGANISM ISOLATION | |
Sample Isolation Publication
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Sample Collection Site
(MIGS-13)
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Cow gastrointesitnal tract |
Isolation Country |
USA |
Sample Isolation Comments |
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Sample Collection Method
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Contact Name
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Cherie Ziemer |
Contact Email
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cherie.ziemer@ars.usda.gov |
HOST METADATA | |
Isolation Host Name
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Bos taurus |
Host Taxonomy ID
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9913 |
Host Gender |
Female |
Host Race |
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Host Age |
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Host Health Condition |
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Patient Visit Number |
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Host Medication |
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Medical Record Number |
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Host Body Site |
Gastrointestinal tract |
Host Body Subsite |
Rectal |
Host Body Product |
Feces |
Host Specificity or Range |
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Host Comments |
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ECOSYSTEM CLASSIFICATION
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|
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Ecosystem |
Host-associated |
Ecosystem Category |
Mammals |
Ecosystem Type |
Digestive system |
Ecosystem Subtype |
Unclassified |
Specific Ecosystem |
Unclassified |
ENVIRONMENTAL INFORMATION | |
Geographic Location
(MIGS-4)
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Ames, Iowa, USA |
Latitude
(MIGS-4.1)
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42.0347222 |
Longitude
(MIGS-4.2)
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-93.6197222 |
LatLong Information
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Geographical Map | |
Altitude (MIGS-4.4) |
287 Meters
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Elevation |
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Depth (MIGS-4.3) |
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Subsurface Depth |
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Sample Collection Temperature (Celsius) |
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Chlorophyll Concentration |
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Nitrate Concentration |
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Oxygen Concentration |
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Salinity Concentration |
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Methane Concentration (mmol) |
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Sample Conductivity |
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Growth Conditions |
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Bicarbonate Concentration (mM) |
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Soluble Iron Concentration (uM) |
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Hydrogen Sulfide Concentration (mM) |
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Hydrogen Sulfide Presence |
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Irradiance |
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ProPortal Ocean |
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ProPortal Isolation |
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ProPortal Station |
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ProPortal WOA Temperature |
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ProPortal WOA Salinty |
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ProPortal WOA Oxygen |
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ProPortal WOA Silicate |
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ProPortal WOA Phosphate |
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ProPortal WOA Nitrate |
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