Studies
|
38,700 |
|
Biosamples
|
80,966 |
|
Sequencing Projects
|
303,693 |
|
Analysis Projects
|
245,519 |
| Organisms | 361,580 |
| ORGANISM INFORMATION | |
|---|---|
| GOLD Organism ID |
Go0013229 |
|
Organism Name
|
Rubellimicrobium mesophilum DSM 19309 |
| Other Names |
|
| Common Name |
|
|
NCBI Taxonomy ID
|
442562 |
| Domain |
BACTERIAL |
| Phylum |
PROTEOBACTERIA-ALPHA |
|
Genus
|
Rubellimicrobium |
| Genus Synonyms |
|
|
Species
|
Rubellimicrobium mesophilum |
| Species Synonyms |
|
| Serovar/Cultivar |
|
| Strain |
DSM 19309 |
| Subspecies |
|
| Type Strain |
Yes |
| Culture Collection |
DSM 19309 |
| Organism Type |
Natural |
| Cultured |
Yes |
| Culture Type |
Isolate |
| Comments |
|
| Biosafety Level |
1 |
|
Taxon DOI
|
10.1601/tx.13589 |
|
Exemplar DOI
|
10.1601/ex.13589 |
|
Exemplar Name
|
Rubellimicrobium mesophilum |
| Genbank 16S ID |
|
| Is Public |
Yes |
| Last Modified By |
Supratim Mukherjee
on 2019-06-18 |
| Related Sequencing Projects |
1 |
| Related Analysis Projects |
1 |
| NCBI TAXONOMY | |
|---|---|
| NCBI Organism Name |
Rubellimicrobium mesophilum DSM 19309 |
|
NCBI Tax ID
|
442562 |
| NCBI Superkingdom |
Bacteria |
| NCBI Kingdom |
|
| NCBI Phylum |
Proteobacteria |
| NCBI Class |
Alphaproteobacteria |
| NCBI Order |
Rhodobacterales |
| NCBI Family |
Rhodobacteraceae |
| NCBI Genus |
Rubellimicrobium |
| NCBI Species |
Rubellimicrobium mesophilum |
| ORGANISM METADATA | |
|---|---|
| Cell Diameter |
0.4-0.7 um |
| Cell Shape |
Rod-shaped |
| Color |
Pink |
| Gram Stain |
Gram- |
| Motility |
Motile |
| Oxygen Requirement (MIGS-22) |
Aerobe |
| pH |
7-11 |
| Salinity (MIGS-6.3) |
Stenohaline |
| Pressure |
|
| Sporulation |
Nonsporulating |
|
Carbon Source
|
|
| Biotic Relationships (MIGS-14) |
Free living |
| Temperature Optimum |
28 C |
| Temperature Range |
Mesophile |
| Cell Length |
1.6-3.4 um |
| Commercial Strain |
No |
| Commercial Strain Comments |
|
| Cell Arrangements |
|
| Diseases (MIGS-15) |
|
| Habitats (MIGS-6) |
Soil |
| Metabolism |
|
| Phenotypes |
Non-Pathogen Catalase positive |
| Energy Sources |
|
| COLLECTION DATE | |
|---|---|
|
Collection Date
(MIGS-5)
|
4/1/2006 |
| ORGANISM ISOLATION | |
|
Sample Isolation Publication
|
18676459
|
|
Sample Collection Site
(MIGS-13)
|
soil, Bigeum island, Korea |
| Isolation Country |
South Korea |
| Sample Isolation Comments |
|
|
Sample Collection Method
|
dilution-plating |
|
Contact Name
|
Hans-Peter Klenk |
|
Contact Email
|
hpk@dsmz.de |
|
ECOSYSTEM CLASSIFICATION
|
|
|---|---|
| Ecosystem |
Environmental |
| Ecosystem Category |
Terrestrial |
| Ecosystem Type |
Soil |
| Ecosystem Subtype |
Unclassified |
| Specific Ecosystem |
Unclassified |
| ENVIRONMENTAL INFORMATION | |
|
Geographic Location
(MIGS-4)
|
Bigeum island |
|
LatLong Information
|
Inferred |
|
Latitude
(MIGS-4.1)
|
34.739 |
|
Longitude
(MIGS-4.2)
|
125.92 |
| Geographical Map | |
| Altitude (MIGS-4.4) |
|
| Elevation |
|
| Depth (MIGS-4.3) |
|
| Subsurface Depth |
|
| Sample Collection Temperature |
28C |
| Chlorophyll Concentration |
|
| Nitrate Concentration |
|
| Oxygen Concentration |
|
| Salinity Concentration |
|
| Methane Concentration (mmol) |
|
| Sample Conductivity |
|
| Growth Conditions |
|
| Bicarbonate Concentration (mM) |
|
| Soluble Iron Concentration (uM) |
|
| Hydrogen Sulfide Concentration (mM) |
|
| Hydrogen Sulfide Presence |
|
| Irradiance |
|
| ProPortal Ocean |
|
| ProPortal Isolation |
|
| ProPortal Station |
|
| ProPortal WOA Temperature |
|
| ProPortal WOA Salinty |
|
| ProPortal WOA Oxygen |
|
| ProPortal WOA Silicate |
|
| ProPortal WOA Phosphate |
|
| ProPortal WOA Nitrate |
|
