Studies
|
38,700 |
|
Biosamples
|
80,966 |
|
Sequencing Projects
|
303,693 |
|
Analysis Projects
|
245,519 |
| Organisms | 361,580 |
| ORGANISM INFORMATION | |
|---|---|
| GOLD Organism ID |
Go0006599 |
|
Organism Name
|
Escherichia coli HB101 |
| Other Names |
|
| Common Name |
|
|
NCBI Taxonomy ID
|
634468 |
| Domain |
BACTERIAL |
| Phylum |
PROTEOBACTERIA-GAMMA |
|
Genus
|
Escherichia |
| Genus Synonyms |
|
|
Species
|
Escherichia coli |
| Species Synonyms |
|
| Serovar/Cultivar |
|
| Strain |
HB101 |
| Subspecies |
|
| Type Strain |
Unknown |
| Culture Collection |
|
| Organism Type |
Natural |
| Cultured |
Yes |
| Culture Type |
Isolate |
| Comments |
|
| Biosafety Level |
|
|
Taxon DOI
|
|
|
Exemplar DOI
|
|
|
Exemplar Name
|
|
| Genbank 16S ID |
|
| Is Public |
Yes |
| Last Modified By |
Tatiparthi Reddy
on 2017-03-14 |
| Related Sequencing Projects |
2 |
| Related Analysis Projects |
1 |
| NCBI TAXONOMY | |
|---|---|
| NCBI Organism Name |
Escherichia coli HB101 |
|
NCBI Tax ID
|
634468 |
| NCBI Superkingdom |
Bacteria |
| NCBI Kingdom |
|
| NCBI Phylum |
Proteobacteria |
| NCBI Class |
Gammaproteobacteria |
| NCBI Order |
Enterobacterales |
| NCBI Family |
Enterobacteriaceae |
| NCBI Genus |
Escherichia |
| NCBI Species |
Escherichia coli |
| ORGANISM METADATA | |
|---|---|
| Cell Diameter |
|
| Cell Shape |
Rod-shaped |
| Color |
|
| Gram Stain |
Gram- |
| Motility |
Motile |
| Oxygen Requirement (MIGS-22) |
Facultative |
| pH |
|
| Salinity (MIGS-6.3) |
|
| Pressure |
|
| Sporulation |
Nonsporulating |
|
Carbon Source
|
|
| Biotic Relationships (MIGS-14) |
Free living |
| Temperature Optimum |
37 |
| Temperature Range |
Mesophile |
| Cell Length |
|
| Commercial Strain |
|
| Commercial Strain Comments |
|
| Cell Arrangements |
Singles Pairs |
| Diseases (MIGS-15) |
None |
| Habitats (MIGS-6) |
Human intestinal microflora Host |
| Metabolism |
|
| Phenotypes |
|
| Energy Sources |
|
| COLLECTION DATE | |
|---|---|
|
Collection Date
(MIGS-5)
|
|
| ORGANISM ISOLATION | |
|
Sample Isolation Publication
|
|
|
Sample Collection Site
(MIGS-13)
|
|
| Isolation Country |
|
| Sample Isolation Comments |
|
|
Sample Collection Method
|
|
|
Contact Name
|
Birren B |
|
Contact Email
|
bwb@BROAD.MIT.EDU |
|
ECOSYSTEM CLASSIFICATION
|
|
|---|---|
| Ecosystem |
|
| Ecosystem Category |
|
| Ecosystem Type |
|
| Ecosystem Subtype |
|
| Specific Ecosystem |
|
| ENVIRONMENTAL INFORMATION | |
|
Geographic Location
(MIGS-4)
|
|
|
LatLong Information
|
|
|
Latitude
(MIGS-4.1)
|
|
|
Longitude
(MIGS-4.2)
|
|
| Geographical Map | No mapping data available. |
| Altitude (MIGS-4.4) |
|
| Elevation |
|
| Depth (MIGS-4.3) |
|
| Subsurface Depth |
|
| Sample Collection Temperature |
|
| Chlorophyll Concentration |
|
| Nitrate Concentration |
|
| Oxygen Concentration |
|
| Salinity Concentration |
|
| Methane Concentration (mmol) |
|
| Sample Conductivity |
|
| Growth Conditions |
|
| Bicarbonate Concentration (mM) |
|
| Soluble Iron Concentration (uM) |
|
| Hydrogen Sulfide Concentration (mM) |
|
| Hydrogen Sulfide Presence |
|
| Irradiance |
|
| ProPortal Ocean |
|
| ProPortal Isolation |
|
| ProPortal Station |
|
| ProPortal WOA Temperature |
|
| ProPortal WOA Salinty |
|
| ProPortal WOA Oxygen |
|
| ProPortal WOA Silicate |
|
| ProPortal WOA Phosphate |
|
| ProPortal WOA Nitrate |
|
